Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00558 ATGGCACTATGTTCATTCACAGCAACACTCTCAATAAGCTCATTCATCTTCTTCTTCCTACTAATGTCTCTCCCTCAGTACTCCACATCTGCTTCTTCTCCCAATGACTTTGTTGGTTCATCCCTCAGAGTTTCTTCCACCAAATTTGCCAACTCTGCTGAAGAAGTTATCACCGTTTTACAAAAAGTCATCTCCATTTTATCACGCTTCACCAACGTCTTCGGCCACTCTCGTGTCTCAAATGCCGTTTCCGATTGCCTCGATTTACTGGACATGTCCTTAGACCAACTTAACCAGTCCATTTCCGCTGCTCAAAATCCCAAAGGGAAGGATAACAGCACTGGAAACCTAAACTGTGATCTAAGGACATGGCTGAGTGCTGTTCTTGTGTATCCAGACACATGTATAGAAGGATTAGAAGGTTCAATTGTAAAGGGTCTTGTATCCTCTGGTCTCGATCATGTAATGTCCTTGGTGGCCAATCTTCTTGGTGAAGTAGTTTCCGGCAATGATGATCAACTCACAACCAACAAGGATCGATTTCCTTCGTGGATCAGAGACGAGGACACAAAGTTGTTGCAGGAAAATGGTGTGACGGCTGATGCTGTGGTGGCTGCTGATGGAAGTGGAGACTACACTAAGGTGATGGATGCCGTATCGGCAGCACCTGAAAGCAGCATGAAAAGATATGTAATATATGTGAAAAAAGGTGTTTATGTGGAAAATGTTGAGATTAAGAAGAAGAAATGGAATATCATGTTGATTGGTGAAGGTATGGATGCTACTATTATCTCCGGCAGTCGGAATTATGTGGACGGTTCGACAACTTTCCGGTCAGCTACCTTTGCTGTAAGTGGTAGAGGGTTCATAGCACGCGACATTTCATTTCAGAACACCGCAGGTGCCGAGAAGCACCAAGCAGTGGCGTTAAGATCAGACTCTGACCTCTCAGTATTTTACCGGTGTGGGATATTCGGTTATCAAGATAGCCTATATACTCACACCATGCGTCAGTTCTACCGCGAATGCAAAATTAGTGGTACTGTGGATTTCATCTTTGGAGACGCTACTTCTGTGTTCCAAAACTGTCAAATACTAGCCAAGAAAGGGATGCCTAAACAAAAGAACACTGTTACTGCTCAAGGACGAAAAGACCCGAACCAACCAACCGGTTTCTCCTTCCAGTTTTGTAACATTTCCGCAGATTCTGACCTTCTACCATTGGTCACAACCATCCCAACATACCTTGGTAGACCCTGGAAGACTTATTCGCGAACAATTTTTATGCAATCCTTCATGAGTGATGCAATAAGGCCAGAAGGGTGGTTAGAGTGGAACGGTAATTTTGCTTTGAACACATTGTACTACGGTGAATACATGAACTCTGGACCGGGTGCTGGGGTAGCTAACCGGGTGAAATGGTCAGGATACCATGTATTCAATGATTCGAGCGAGGCTACTAAATTCACTGTGGCTCAATTTATTGAGGGGAATCTCTGGTTACCTTCCACTGGTGTAACTTACACTTCTGGTTTGAAAGTGTAA 1545 0.4401 MALCSFTATLSISSFIFFFLLMSLPQYSTSASSPNDFVGSSLRVSSTKFANSAEEVITVLQKVISILSRFTNVFGHSRVSNAVSDCLDLLDMSLDQLNQSISAAQNPKGKDNSTGNLNCDLRTWLSAVLVYPDTCIEGLEGSIVKGLVSSGLDHVMSLVANLLGEVVSGNDDQLTTNKDRFPSWIRDEDTKLLQENGVTADAVVAADGSGDYTKVMDAVSAAPESSMKRYVIYVKKGVYVENVEIKKKKWNIMLIGEGMDATIISGSRNYVDGSTTFRSATFAVSGRGFIARDISFQNTAGAEKHQAVALRSDSDLSVFYRCGIFGYQDSLYTHTMRQFYRECKISGTVDFIFGDATSVFQNCQILAKKGMPKQKNTVTAQGRKDPNQPTGFSFQFCNISADSDLLPLVTTIPTYLGRPWKTYSRTIFMQSFMSDAIRPEGWLEWNGNFALNTLYYGEYMNSGPGAGVANRVKWSGYHVFNDSSEATKFTVAQFIEGNLWLPSTGVTYTSGLKV 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00558 514 ProSitePatterns Pectinesterase signature 2. 345 354 IPR033131 -
Mepo1g00558 514 Gene3D - 195 512 IPR012334 -
Mepo1g00558 514 CDD PMEI-like_4 12 170 - -
Mepo1g00558 514 PANTHER PECTINESTERASE 31 502 - -
Mepo1g00558 514 SUPERFAMILY Pectin lyase-like 199 511 IPR011050 -
Mepo1g00558 514 ProSitePatterns Pectinesterase signature 1. 226 245 IPR018040 -
Mepo1g00558 514 FunFam Pectinesterase 195 512 - -
Mepo1g00558 514 Gene3D Invertase/pectin methylesterase inhibitor family protein 15 167 IPR035513 -
Mepo1g00558 514 Pfam Pectinesterase 201 498 IPR000070 GO:0030599|GO:0042545
Mepo1g00558 514 SMART PMEI_2 7 165 IPR006501 GO:0004857
Mepo1g00558 514 Pfam Plant invertase/pectin methylesterase inhibitor 24 163 IPR006501 GO:0004857
Mepo1g00558 514 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 163 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00558 Mepo-Chr1 5365061 5368279 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00558 13 512 Carbohydrate Esterase AT3G43270 61.240 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00558 K01051 - gmx:100812756 687.952