Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00556 ATGGCACTATGTTCATTCACAACAACACTCTCAATAAGCTCATTCATCTTCTTCTTCCTACTAATCTCTCTCCCTCAGTACTCCACATCTGCTTCTTCTCCCAATGACTTTGTTGGTTCATCCCTCAGAGTTTCTTCCACCAAATTTGCCAACTCTGCTGAAGAAGTTATCACCGTTTTACAAAAAGTCACCTCCATTTTATCACGCTTCACCTACACCTTCAGCCATCACTCTTTTCACTCAAATGCCATTTCCGATTGCCTCGATTTACTCGACATGTCCTCCGACCAACTTAGTTGGTCTGTTTCCGCTACTCAGAATCCCAAAGGGAAGAATAACAGTACTGGAAATCTAAGCTCTGATCTAAGAACATGGCTGAGTGCTGTTCTTGTGAATACAGACACATGTTTAGAAGGATTACAAGGATTAGAAGAAGGTACATTTGCAAAGAGTGATGTATCAAGCGGTCTTGATCGTGTAATGTCATTGGTGAAGAAGAATCTTTTTGAAGTAGTCCTCAGCAATGATCAACTTGCAACTGCTACCTCCGAAGATAGATTTCCTACGTGGATTAACGACGGAGACAAGAAGTTTTTTGAGGCAAATGAAATGACTGCTGATGCTATTGTGGCGGCTGATGGGAGTGGGAACTACACTACGGTGATGGATGCCGTATTGGCAGCACCTAAATTCAGCATGAAAAGATATGTTATATATGTGAAAAAAGGTGTATATGTTGAGAATGTTGAGATTGATAGGAAGAAATGGAATATTATGATGATTGGTGAAGGCATGGATGCTACATTTATCTCCGGTAGTCGGAATCGTGTGGACGGTTGGACTACTTTCCGATCAGCTACCTTTGCTGTAAATGGTAGAGGGTTCATAGCATGCAACATTTCATTTCAAAACACCGCAGGTCCCGAGAAGGAACAAGCAGTGGCTTTAAGATCGGACTCTGACCTCTCTGTATTTTATCGGTGTGGGATATTCGGTTATCAAGATAGCCTATATACCCATACACAGCGCCAATTCTACAAAGCGTGTAAAATCACTGGTACGGTGGATTTCATCTTTGGAAATGGCACAGTTATGTTCCAAGGTTGCGAAATTCTAGCCAAGAAAGGGATGCAAGGACAAAAGAATACTGTCGCGGCCCATGGACGAACAGACCCGAACACAACAACCGGTTTCTCCTTCCAATTCTGTAACATTTCAGCAGACTTTGACCTTCTACCTTTTATTGCAACCATGCCAACATACCTTGGTAGACCCTGGAGGCCTTATTCGCGAACAATTTTTATGCAATCCTATATGAGTAACGCAATAAGTCCCGAAGGGTGGTTAGAGTACAATGGAAGTGTTGGTTTGGATACATTGTACTACAGTGAATACATGAACACCGGACCGGGTGCTGGGGTAGCGAATCGGGTGAAATGGTCTGGGTACCATGTAATGAATGATTCGAGCGAGGCTGAAAAGTTTACTGTAGCTCAATTTATTCTGGGGGATCTTTGGTTACCTTCCGCTGGAGTAACTTACACTGCAGGTTTGACAGTGTAA 1563 0.428 MALCSFTTTLSISSFIFFFLLISLPQYSTSASSPNDFVGSSLRVSSTKFANSAEEVITVLQKVTSILSRFTYTFSHHSFHSNAISDCLDLLDMSSDQLSWSVSATQNPKGKNNSTGNLSSDLRTWLSAVLVNTDTCLEGLQGLEEGTFAKSDVSSGLDRVMSLVKKNLFEVVLSNDQLATATSEDRFPTWINDGDKKFFEANEMTADAIVAADGSGNYTTVMDAVLAAPKFSMKRYVIYVKKGVYVENVEIDRKKWNIMMIGEGMDATFISGSRNRVDGWTTFRSATFAVNGRGFIACNISFQNTAGPEKEQAVALRSDSDLSVFYRCGIFGYQDSLYTHTQRQFYKACKITGTVDFIFGNGTVMFQGCEILAKKGMQGQKNTVAAHGRTDPNTTTGFSFQFCNISADFDLLPFIATMPTYLGRPWRPYSRTIFMQSYMSNAISPEGWLEYNGSVGLDTLYYSEYMNTGPGAGVANRVKWSGYHVMNDSSEAEKFTVAQFILGDLWLPSAGVTYTAGLTV 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00556 520 ProSitePatterns Pectinesterase signature 2. 351 360 IPR033131 -
Mepo1g00556 520 Gene3D Invertase/pectin methylesterase inhibitor family protein 15 172 IPR035513 -
Mepo1g00556 520 CDD PMEI-like_4 12 175 - -
Mepo1g00556 520 Pfam Plant invertase/pectin methylesterase inhibitor 26 159 IPR006501 GO:0004857
Mepo1g00556 520 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 74 155 IPR035513 -
Mepo1g00556 520 ProSitePatterns Pectinesterase signature 1. 232 251 IPR018040 -
Mepo1g00556 520 SUPERFAMILY Pectin lyase-like 205 517 IPR011050 -
Mepo1g00556 520 FunFam Pectinesterase 201 518 - -
Mepo1g00556 520 SMART PMEI_2 7 174 IPR006501 GO:0004857
Mepo1g00556 520 Pfam Pectinesterase 207 504 IPR000070 GO:0030599|GO:0042545
Mepo1g00556 520 Gene3D - 201 518 IPR012334 -
Mepo1g00556 520 PANTHER PECTINESTERASE 31 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00556 Mepo-Chr1 5352779 5355405 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00556 13 518 Carbohydrate Esterase AT3G43270 56.154 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00556 K01051 - gmx:100777500 656.751