Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00553 ATGGCTAATTTATCTTCTAAACTCTTTCTTCTTCTCTTAACAATCTTCCATTCACACACTTTAGCTTTCAACAACACCACTTCTTCCACAACAACATTGCATGCAAAAATCTCTTCAATAAAATCCTTCTGCAGAACTACTCCATACCCTGAAGTTTGCTTCAATTCATCAAAACTCTCCATCTCAATAGACATAAATCCAAACATCATTAACATCCTTCTTCATTCCCTTCAAGTATCAATATCTGAAACCACAAAGCTATCTAATGAATTCAACAATGCTCACTCAAACATCATAGAGAACAAAAGAGGAGCTATACAAGATTGCAAAGAACTTCAACAATCTACCTTATCTTCACTAAAAAGATCATTATCTGGAATTCATTCATCAAAATCTAGGAAGTTAGTTGATGCAAGAACTTATCTCAGTGCAGCCCTTACCAACAAGAACACATGTTTAGAAAGCTTAGATTCTGCTTCGGGTACAATGAAGCAAGTTTTAGTTGATTCAGTGATCAACACTTACAAGCATGTTAGTAATTCTCTGTCAATGTTTCCTAAGCCTGAGGTAAGAGCTTCTAAAGGACATGGAAACCGGCGTTTGATGGATGCTCTCATGTGGTTGTCAAGCAAAGATCGCCGCAGGTTCTTGCAAAACACTGATGATGTGATTGTTGTCGCTGCAGATGGAACGGGAAACTTTATTACCATTAATGAAGCCATTGACTTTGCTCCAAATAACAGCTATGCTAGGACAATAATCTATATAAAAGAAGGGATATATGAGGAAAATGTTGAAATCTCAAGCAATAAAACCAATATTGTTCTACTTGGTGATGGAAGGGATCTCACTGTCATTACTGGCAATAGAAGTGATGTTGATGGCTGGACCACCTTTAGATCTGCGACTTTAGCGGTTTCTGGCGAAGGATTTCTGGCACGTGATATAGCTTTTGAGAACAAGGCAGGACCAGAGAAGCATCAAGCAGTAGCATTAAGAGTGAATGCAGACTTAACAGCTTTTTACAAATGTGCAATGTATGGTTACCAAGACACACTTTATGTTCACTCATTTAGACAATTCTATAGAGAGTGTGACATTTTTGGGACCATAGATTACATATTTGGAAATGCAGCAGTAGTTTTACAAGCATGTAACATTATATCAAGAATGCCATTACCTAACCAATACACTGTCATCACTGCACAGTCAAGAGATTCACCTGATGAGGACACTGGCATCTCAATCCAAAACTGTTCAATTTTAGCTACTACTGATTTGTATGACAACTCTAACAACATCAAGAGTTACCTTGGAAGGCCTTGGAGGGTTTATTCTAGGACTGTTTACATTGAGTCTTACATTGATGTGTTCATTGATCCAATGGGATGGACAAAATGGTCTTCTGATGATGATAAAGGGCTGGACACTTTGTATTATGGTGAGTTTGCAAATTACGGACCTGGTTCTGGGACGGATAACCGAGTAAAATGGTTAGGGTATCATTTAATGGATTTTGATAGTGCAAATAATTTCACAGTTTCAGAGTTTATTATTGGTGATGCTTGGATTGGTTCTACTTCTTTTCCTTATGATGATGGGATCTGA 1608 0.3756 MANLSSKLFLLLLTIFHSHTLAFNNTTSSTTTLHAKISSIKSFCRTTPYPEVCFNSSKLSISIDINPNIINILLHSLQVSISETTKLSNEFNNAHSNIIENKRGAIQDCKELQQSTLSSLKRSLSGIHSSKSRKLVDARTYLSAALTNKNTCLESLDSASGTMKQVLVDSVINTYKHVSNSLSMFPKPEVRASKGHGNRRLMDALMWLSSKDRRRFLQNTDDVIVVAADGTGNFITINEAIDFAPNNSYARTIIYIKEGIYEENVEISSNKTNIVLLGDGRDLTVITGNRSDVDGWTTFRSATLAVSGEGFLARDIAFENKAGPEKHQAVALRVNADLTAFYKCAMYGYQDTLYVHSFRQFYRECDIFGTIDYIFGNAAVVLQACNIISRMPLPNQYTVITAQSRDSPDEDTGISIQNCSILATTDLYDNSNNIKSYLGRPWRVYSRTVYIESYIDVFIDPMGWTKWSSDDDKGLDTLYYGEFANYGPGSGTDNRVKWLGYHLMDFDSANNFTVSEFIIGDAWIGSTSFPYDDGI 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00553 535 Pfam Plant invertase/pectin methylesterase inhibitor 39 184 IPR006501 GO:0004857
Mepo1g00553 535 ProSitePatterns Pectinesterase signature 2. 367 376 IPR033131 -
Mepo1g00553 535 PANTHER PECTINESTERASE 16 525 - -
Mepo1g00553 535 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 186 IPR035513 -
Mepo1g00553 535 Gene3D - 217 535 IPR012334 -
Mepo1g00553 535 NCBIfam pectinesterase inhibitor domain 11 185 IPR006501 GO:0004857
Mepo1g00553 535 FunFam Pectinesterase 36 187 - -
Mepo1g00553 535 SMART PMEI_2 35 184 IPR006501 GO:0004857
Mepo1g00553 535 CDD PMEI-like_3 42 188 - -
Mepo1g00553 535 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 187 IPR035513 -
Mepo1g00553 535 SUPERFAMILY Pectin lyase-like 221 532 IPR011050 -
Mepo1g00553 535 Pfam Pectinesterase 224 521 IPR000070 GO:0030599|GO:0042545
Mepo1g00553 535 FunFam Pectinesterase 217 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00553 Mepo-Chr1 5336022 5338573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00553 32 535 Carbohydrate Esterase AT2G26440 61.877 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00553 - K01051 gmx:102666380 798.505