Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00552 ATGGCGTTTCAAGATTTCGACCTCATCAATGAACGTCGAAAAAGTGAGAAGAGAGCACAAATGAGGAAAAGGATCATCATTGGAGTTATTTCTACCGTTGTCTTCGTTGGTCTCATAGGTTGCGCATTCTTTGTTGCCACCACAAAATACAGTCCTTTTGGTGGTGGTAGCCGTCAAACCGAAGACACTTCAACTGCTAATGGTAGCAAACATGTTGCACATTCAGAAAAGGTAGTGAAATTGGTATGCAGTTCTGCAGATTACAAAGAAAAATGTGAAGGACCTCTTAACAAAGCAGTGGAAAAGGATCCTAAACTTCAACACCCTAAAGACCTTCTCAAAGTTTATCTTAAAACTGTAGAGGATGAGGTTAACAAAGCCTTCAACAAAACAAACTCATTCAAATTTGATACGAAAGAAGAGAAAGCTGCATTTGAGGATTGTAAAGAGATGATTCAATACGCTAAGGATGATTTAGCTACCTCTATTGATCAACTTAGTGAAGCTGACATGAAAAAACTTGCTTCAAAAACACCTGACTTGAACAGTTGGTTGAGTGCTGTTATCACTTTCCAAGAAACTTGTGTTGATGGTTTTCCCGATGGAAAATTGAAGACTGATCTTAAGAAATTGTTTCAGGGTTCTAGGGAATTTGTTAGCAATTCTCTTGCTATTGTGTCTCAGGTTTCTACATTCCTTTCTTCATTGCAGACAGTGGGGGGCCCCCGTATGTTGTTGTCTGATAACTCCCCTGTTGCTTCTATGGATTCTGAAGGTATTCCTTCATGGATTCAATCTGAAGAGAGAAGGGTGTTGAAGGCTGCTGATATTAGACCTAAACCTAATGTCGTTGTTGCTAAAGATGGCAGTGGTAACTTCAGAACCATCTCTGCAGCTTTGGCTGCCATCCCTCCAAATTTCCTTGGAAGGTATGTGATTTATGTTAAAGAAGGAGTGTACGATGAGGTAGTGACAATAACAGATAAAATGAAAGATATAACCATGTATGGTGATGGATCACAAAAGAGTATCATCACTGGTAGGAAAAACTTTAGGGATGGAGTCACGACCATCAACACCGCAAGTTTTGTGGTGCTAGGAGAAGGATTTTTGGGTCTAGCAATGGGATTCAGAAACACAGCTGGTCCTGAAGGACATCAAGCAGTAGCAGCTAGAGTCCAAGCAGACCGTGCTGTGTTTGCCAACTGCCGTTTTGAAGGCTTCCAAGACACACTATACACAGTGGCACATAGACAATTCTTCCGTAGCTGCATCATAACAGGAACAATCGATTTCATCTTTGGTGACGCAGCCGTTATATTCCAAAACTGCATCTTGGTTGTTAAAAAACCAAGTGTCGGCCAAAGTAACGCGGTGACAGCACAAGGAAGATTGGACAACAAACAAAATACAGCAATTGTTCTACATAAATGTACAATTAAAGCTGATGACGCGTTGATTCCTGTTAAAGCCACAGTAAAAAGTTACCTTGGTAGACCTTGGAAGCAATTTTCAAGAACAATTGTTATGGAAAGTGAAATTGGTGATTTTATTAGCCCTGAGGGATGGTCACCTTGGAATGGAAACTTTGCTTTAAGTACATTGTATTATGCTGAGTATGCTAACACTGGACCTGGTGCTAGTACTACTGCTAGAGTTAAGTGGCCTACTCTTAAAGTTATTAACAAAGCAGAAGCTAGCAAGTGGACTGTAGGAACATTCTTGACAGGCACATGGGTTCAAAACTCAGGTGTACCTTCTCAGCTTGGATTGTACAAATGA 1782 0.4057 MAFQDFDLINERRKSEKRAQMRKRIIIGVISTVVFVGLIGCAFFVATTKYSPFGGGSRQTEDTSTANGSKHVAHSEKVVKLVCSSADYKEKCEGPLNKAVEKDPKLQHPKDLLKVYLKTVEDEVNKAFNKTNSFKFDTKEEKAAFEDCKEMIQYAKDDLATSIDQLSEADMKKLASKTPDLNSWLSAVITFQETCVDGFPDGKLKTDLKKLFQGSREFVSNSLAIVSQVSTFLSSLQTVGGPRMLLSDNSPVASMDSEGIPSWIQSEERRVLKAADIRPKPNVVVAKDGSGNFRTISAALAAIPPNFLGRYVIYVKEGVYDEVVTITDKMKDITMYGDGSQKSIITGRKNFRDGVTTINTASFVVLGEGFLGLAMGFRNTAGPEGHQAVAARVQADRAVFANCRFEGFQDTLYTVAHRQFFRSCIITGTIDFIFGDAAVIFQNCILVVKKPSVGQSNAVTAQGRLDNKQNTAIVLHKCTIKADDALIPVKATVKSYLGRPWKQFSRTIVMESEIGDFISPEGWSPWNGNFALSTLYYAEYANTGPGASTTARVKWPTLKVINKAEASKWTVGTFLTGTWVQNSGVPSQLGLYK 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00552 593 PANTHER PECTINESTERASE 36 581 - -
Mepo1g00552 593 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 77 229 IPR035513 -
Mepo1g00552 593 SMART PMEI_2 74 225 IPR006501 GO:0004857
Mepo1g00552 593 FunFam Pectinesterase 75 230 - -
Mepo1g00552 593 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 230 IPR035513 -
Mepo1g00552 593 CDD PMEI-like_3 81 231 - -
Mepo1g00552 593 Pfam Pectinesterase 282 577 IPR000070 GO:0030599|GO:0042545
Mepo1g00552 593 SUPERFAMILY Pectin lyase-like 279 584 IPR011050 -
Mepo1g00552 593 Gene3D - 277 591 IPR012334 -
Mepo1g00552 593 NCBIfam pectinesterase inhibitor domain 72 229 IPR006501 GO:0004857
Mepo1g00552 593 ProSitePatterns Pectinesterase signature 2. 426 435 IPR033131 -
Mepo1g00552 593 Pfam Plant invertase/pectin methylesterase inhibitor 78 225 IPR006501 GO:0004857
Mepo1g00552 593 FunFam Pectinesterase 276 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00552 Mepo-Chr1 5329993 5332302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00552 1 592 Carbohydrate Esterase AT4G33230 48.852 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00552 - - gmx:100784679 825.083