Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00535 ATGAGTCACGTTGAAACTGGAGCGAAGTTATTGGCTACACTAGCACTTGCTCTCTTCCATCTTCTTCAAGTAACTCCTACATTGTCCGAATTCAACCGTCACCGTGAAATTACCTTGTTAGACGAACACTTAACTGCTGCGGAAACCACCGTCAGAGTGGTGAGTGTTCGGAAAGACGGAACCGGAGATTTTACGACGGTGACGGATGCCGTTAAAAGCATTCCGTCGGGGAACAAAAGGAGAGTGGTGGTGTGGATTGGAATGGGAGAATATAGAGAGAAAATAACAGTTGATAAGTCGAAACGTTTTGTAACGTTTTATGGGGAAAGGAATGGGAAAGACAATGACATGATGCCCATTATAACGTACGACGCAACCGCTTTGCGTTATGGGACACTTGATAGTGCAACCGTCGCTGTTGATGCTGACTACTTTGTTGCTGTCAATGTAGCATTTGTGAACTCGTCTCCTATGCCGGACGAAAATAGTGTTGGAGGACAAGCATTAGCGATGAGGATATCAGGGGATAAGGCTGCATTCTACAACTGTAGGTTCATCGGATTTCAAGATACCTTGTGCGATGACTATGGCAAACATTTTTTCAAGGACTGCTTTATTCAAGGAACCTATGATTTCATCTTTGGAAATGGAAAATCCATCTACTTGAGAACTACTATAGAATCGGTTGCAAAGGGTTTGAATGTCATCACAGCACAAGGTAGGGAAAGAATGTCAGACGACACTGGATTCACTTTTGTGCATTGCAACATAACTGGAAGTGGTCACAGGAACACTTATCTTGGTCGTGGTTGGAGGAGGAGCCCTAGGGTTGTATTTGCCTATACCTATATGGACTCTGTCGTCAATTCCAGAGGATGGTACCACCATGGGCCCAATGAGACAATCTTTTTGGGAGAATACAAGTGCAGTGGACCCGGTGCTGTTAGGTTAAACTATAAAAGGATACTATCTGATGAAGAAGCAAAACACTTCTTGAGCATGGCTTATATTCATGGAGAACAGTGGGTTCGTCCACCTCCCAAACTTTGA 1050 0.44 MSHVETGAKLLATLALALFHLLQVTPTLSEFNRHREITLLDEHLTAAETTVRVVSVRKDGTGDFTTVTDAVKSIPSGNKRRVVVWIGMGEYREKITVDKSKRFVTFYGERNGKDNDMMPIITYDATALRYGTLDSATVAVDADYFVAVNVAFVNSSPMPDENSVGGQALAMRISGDKAAFYNCRFIGFQDTLCDDYGKHFFKDCFIQGTYDFIFGNGKSIYLRTTIESVAKGLNVITAQGRERMSDDTGFTFVHCNITGSGHRNTYLGRGWRRSPRVVFAYTYMDSVVNSRGWYHHGPNETIFLGEYKCSGPGAVRLNYKRILSDEEAKHFLSMAYIHGEQWVRPPPKL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00535 349 Pfam Pectinesterase 54 339 IPR000070 GO:0030599|GO:0042545
Mepo1g00535 349 FunFam Pectinesterase 49 345 - -
Mepo1g00535 349 Gene3D - 48 346 IPR012334 -
Mepo1g00535 349 SUPERFAMILY Pectin lyase-like 52 345 IPR011050 -
Mepo1g00535 349 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 42 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00535 Mepo-Chr1 5119728 5121589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00535 40 349 Carbohydrate Esterase AT1G69940 50.316 2.12e-118 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00535 K01051 - gmx:100790786 500.36