Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00534 ATGGACGATGCTGGAGTCTCGAAATTAACTGCTAAATTGAAGGAAATATTTCAAAAGTGGCAAGTGGGTTATAAAGAGGGCAATGATGAACATTCTGGTGTGAATCATGGGGGAATATCACCTATGATTAACAAAAGGTTAAACAGTTTAGTGTCTTTTGATTCTGATGAAGATAACTGCAATAGTCCTAAAGCACCGCATGATGTTCCAAAAGGGTACTTAGCTGTCTATGTTGGTCCTGAGCTTAGGAGATTCATCATTCCAACAAGCTACCTTAGTCATTCTCTTTTCAAAATGTTGTTGGAAAAAGCTGCTGATGAATTTGGTTTTAATCAGTGTGGTGGACTTACAATTCCATGTGAAATTGAAACCTTTAAATACCTTCTCAGCTGTATGGAGAATACTCAGCTTCATCATGATCACACCTCTTCTGGAAACACAGGAACTGTGGAAGAGAGAATAAACTAA 468 0.3782 MDDAGVSKLTAKLKEIFQKWQVGYKEGNDEHSGVNHGGISPMINKRLNSLVSFDSDEDNCNSPKAPHDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKMLLEKAADEFGFNQCGGLTIPCEIETFKYLLSCMENTQLHHDHTSSGNTGTVEERIN 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00534 155 Pfam Auxin responsive protein 55 131 IPR003676 GO:0009733
Mepo1g00534 155 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 55 128 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00534 Mepo-Chr1 5112860 5113971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00534 1 143 Calmodulin-binding Proteins AT5G20810 60.645 3.52e-58 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00534 K14488 - gmx:100795275 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00534 1 5112860 5113971 Mepo1g00534 1 5112860 5113971 ECH
Mepo1g00534 1 5112860 5113971 Mepo6g01927 6 22510993 22513787 PCT