Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00495 ATGATGAATGGAAGAAACAGGTATCCTTTTACTCCAACTCAGTGGCAAGAGCTTGAACATCAAGCTCTTATCTACAAATACATGGCTTCTGGTATTTCCATTCCTCCTGATCTTCTACTCACTATCAAAAGAAGCTACTTAGACTCTTCAAGGCTCTCACCTCATCAGTCTCAACACTTTGGGTGGAACTATTTACCAATGGGATTGGGAAGAAAAATAGACCCAGAGCCAGGGAGGTGTAGAAGAACAGATGGAAAGAAATGGAGGTGTTCAAAAGAAGCATATCCAGATTCAAAGTACTGTGAAAGGCACATGCATAGAGGGAAAAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACAACAAACACAGATGCTCCTGCTGCTACTTCAACAATCTTATCAATCACTAAAAATAGTAGTCTTGATTCTGATCATAACACTGCAGCATTAACATCAACAACTCATGACACTAATTACCATTACCCTCAACACTCTTCTTATGCTTCTTCCCATCTTAACCACCCTTTCCTCTATCATAACCCTCCATCCTCAAGGCCTAACTTCTCATTTCAAGACAATAGTGCTCCCTTGTTTCTTGACAATACTGGTTCTTCCTCTCACAATAACAACAGCACTGATTGCAGGAACAGGTATGTTTATGGACTGAAAGAGGAGGTGGATGAACATGCTTTCTTCACTGAACCTTCTGGAACTATAAGAAGTTTATCAGCATCTTCAATGGATGATTCATGGCAACTCACACCACTTACTATAAGCTCCTCTTCCTCTTTTAAACAGAGGAATTGTTCTGGTTTATCCAATGACAATGAGTACTCTTACTTGCAACTTGACAACAACTCAAAACAACCACAGCAAGATCAAGGTTGTTACATCTCAGGTAGTGAAGAAACATTCATGAAACATGGGAAAGAAGAACCTCAGAAGATTTTTCATCGTTTCTTTGATGAATGGCCACCCAAAAGCAGCAGAAACTCATGGCTTGATTTGGATGATAAATCCTCCACTACTCAGCTTTCAATCTCCATTCCTACATCTTCTCATGATTTCACAACTTTTAGTTCCACAAACCAACGAGATGGTTGA 1110 0.3973 MMNGRNRYPFTPTQWQELEHQALIYKYMASGISIPPDLLLTIKRSYLDSSRLSPHQSQHFGWNYLPMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTTNTDAPAATSTILSITKNSSLDSDHNTAALTSTTHDTNYHYPQHSSYASSHLNHPFLYHNPPSSRPNFSFQDNSAPLFLDNTGSSSHNNNSTDCRNRYVYGLKEEVDEHAFFTEPSGTIRSLSASSMDDSWQLTPLTISSSSSFKQRNCSGLSNDNEYSYLQLDNNSKQPQQDQGCYISGSEETFMKHGKEEPQKIFHRFFDEWPPKSSRNSWLDLDDKSSTTQLSISIPTSSHDFTTFSSTNQRDG 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00495 369 Pfam WRC 75 117 IPR014977 -
Mepo1g00495 369 ProSiteProfiles WRC domain profile. 74 118 IPR014977 -
Mepo1g00495 369 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mepo1g00495 369 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mepo1g00495 369 PANTHER GROWTH-REGULATING FACTOR 5 9 357 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mepo1g00495 369 Pfam QLQ 9 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00495 Mepo-Chr1 4707315 4709545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00495 7 117 GRF Transcription Factor Family AT3G13960 71.053 7.26e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mepo1g00495 WRC 7.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00495 - - cam:101508073 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00495 1 4707315 4709545 Mepo1g00495 1 4707315 4709545 ECH
Mepo1g00495 1 4707315 4709545 Mepo6g01816 6 20677840 20680784 PCT