Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00493 ATGGGGAGAAGTCCTTGTTGTGCAAAGGAGGGCTTGAATAGAGGTGCTTGGACAGCTCATGAAGACAAAATTCTCTCCGATTACATTAAGCTCCATGGTGAAGGAAAATGGAGAAACCTTCCCAAAAGAGCAGGTTTAAGAAGATGTGGAAAAAGTTGTAGACTTAGATGGTTGAATTACCTAAGACCAGATATTAAGAGAGGCAACATATCCTCAGATGAAGAAGATCTTATCATCCGACTTCACAAACTACTTGGAAACAGATGGTCTCTAATAGCAGGAAGACTACCAGGGCGAACAGACAATGAAATCAAGAATTACTGGAACACAAATTTAGGAAAAAAGGTTAAAGATCTCCAACAGCAAAACACCAATAGTTCTTCTCCAAAAAATGCAAAGATCACACAAAAACAGAACAATCATAAGCCAATGACGCCAAACTCACATGCTGTCCGTACAAAAGCAACCAAGTGCTCTAAGGTATTATTCATGAATTCACTCCCTAACTCATCAACAATGCATAATTTGCAGAACAAAGTTGAGATAGAGACAAAAACAAAGCCATCAATGCATGTTGATGGTGGGGATAGTGATTCAATGAGTAACAACCAAATGGAGAATGATAATGAATTTTTGTCATTTCCGGATGAAAAAAAAGAACTATCCACAAATTTGCTGGTTGATTTTAACATGGGGGATCATGACATTAGCTTATCAGAACTTCTGAACTCAGATTTCTCAACTACATGCAATTTTGATTACAATGAGCTATTATCACCTTGTTCTGACCAGACTCTTATGTTCTCGGATGAGATTCTCAAGAATTGGACACAATGTAGCTTTGCTGATGAGAATAATGTGCCTAACAACCTTCATTATTTCACTTCTTTTCTCGAATCCAGTGAGGATGTACTAGGAGAATGA 924 0.3777 MGRSPCCAKEGLNRGAWTAHEDKILSDYIKLHGEGKWRNLPKRAGLRRCGKSCRLRWLNYLRPDIKRGNISSDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGKKVKDLQQQNTNSSSPKNAKITQKQNNHKPMTPNSHAVRTKATKCSKVLFMNSLPNSSTMHNLQNKVEIETKTKPSMHVDGGDSDSMSNNQMENDNEFLSFPDEKKELSTNLLVDFNMGDHDISLSELLNSDFSTTCNFDYNELLSPCSDQTLMFSDEILKNWTQCSFADENNVPNNLHYFTSFLESSEDVLGE 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00493 307 CDD SANT 16 61 IPR001005 -
Mepo1g00493 307 Gene3D - 70 145 - -
Mepo1g00493 307 FunFam Transcription factor TT2 70 143 - -
Mepo1g00493 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mepo1g00493 307 FunFam MYB-related transcription factor 13 66 - -
Mepo1g00493 307 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mepo1g00493 307 MobiDBLite consensus disorder prediction 119 152 - -
Mepo1g00493 307 SMART sant 66 114 IPR001005 -
Mepo1g00493 307 SMART sant 13 63 IPR001005 -
Mepo1g00493 307 CDD SANT 71 112 IPR001005 -
Mepo1g00493 307 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mepo1g00493 307 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 204 - -
Mepo1g00493 307 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Mepo1g00493 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mepo1g00493 307 Gene3D - 14 66 - -
Mepo1g00493 307 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mepo1g00493 307 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00493 Mepo-Chr1 4690411 4691771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00493 4 143 MYB Transcription Factor Family AT3G13540 66.429 8.18e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo1g00493 Myb_DNA-binding 8.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00493 K09422 - gmx:100802704 391.349