Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00472 ATGACGAATGAGATATCTGTTCTGCAGGGGCAGTCTGCAGTATTGCACTCTCAACCAAAGGCAACATTTGAAACTCCTGCATACATTGCTCCTGAGGTTTTATTACGAAAGGAGTACAACAGAAAGATTGCAGATGTGTGGTCCTGTGGTGTGACACTTTATGTCATGCTAATTGGTGCATATCCATTTGAAGAACCAGAAGATCATAGAAATTTCAGAAAGACTATTGGAGTGAGCTCTAATTTTACTTCAGGTTCAAAGTATGAATAA 270 0.3926 MTNEISVLQGQSAVLHSQPKATFETPAYIAPEVLLRKEYNRKIADVWSCGVTLYVMLIGAYPFEEPEDHRNFRKTIGVSSNFTSGSKYE 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00472 89 Gene3D Transferase(Phosphotransferase) domain 1 6 87 - -
Mepo1g00472 89 ProSiteProfiles Protein kinase domain profile. 1 89 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00472 89 Pfam Protein kinase domain 16 74 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00472 89 PANTHER SERINE/THREONINE KINASE 19 73 - -
Mepo1g00472 89 SUPERFAMILY Protein kinase-like (PK-like) 19 77 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00472 Mepo-Chr1 4510660 4511600 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00472 11 82 CBL-interacting serine-threonine protein kinases AT5G10930 44.444 4.69e-15 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Mepo1g00472 Pkinase 2.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00472 K14498 - smo:SELMODRAFT_158991 121.324