Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo1g00461 | ATGGGTGACGCCACGAACTGGAACGAAGATGCGTACAGAGAATCCGTATTAAAAGAAAGAGAGATTCAAACTCAAACCGTTTTCAGAACTGCTTGGGCTCCTTCTCAATCTCAATCTCTCATCGTTGCTTCTAGTGATGGTTCCATTGCTTCTTACTCTCTCCCTTCCACCATCACCGCTTCTAAGCTCAAAAATGTTAACCATTCTTATTCTTATTCTTATTCTTATTCAATTCATCATTTCACTGTTTTTAAATTCAAACTACAAATTCATATTTATTTTTATTTGTTGCAGCCATTTGGTTTTGTTAATGCCGATGCTGATGATTTGTTAGCTGAGCCAGATTGCTTGTTTCAAGCGCATCATGGGTCTGCTTATGATGTCAAATTCTATGGTGATGACGAAAATGCTCTCTTGCTCAGTTGTGGTGATGATGGGCGGATTCGAGGATGGAGATGGAAGGAACTTACAAGCTTCAAGTATTATAATATTTCTTCAGAAGGAAATGATATCAAGCCCGTCCTGGATGTGGTAAATCCTCAACACAAAGGTCCTTGGGGTTCACTTTCACCTCTTCCTGAGAATAATGCTATTGCTGTAAATACTCAGGCAGGATCTGTTTTCGCTGCGTCCGGTGATTCTTGTGCATATTGTTGGGATGTGGAAACTGGTAAATTAAAAACGGTATTCAAGGGACACTCTGATTACTTGCATTGCATTGTTGCTCGCAACTCATCCAATCAGATCATAACAGGTTCAGAGGATGGGACAACACGAATTTGGGATTGCAAGAGTGGAAAGTGTATCCAAGTGATTGATCCAGCAAAACATTTGAAGTTAAAAGGACCTGTTTCATGGGTTGGCTCTGTTGCTTTAGATGCAAGTGAGAGCTGGTTGGCTTGCAGTAGTGGACGTAATATATCACTTTGGAACCTTCCTGCTGCAGAGTGCACATTAAACTTTTCCACTCGAGCTTCTGTACAGGATCTGTTATTCGACAATAATCAAATTCTGACAGTTGGTGCAGATCCTATACTCAATCGCTTTGACATGAACGGTGCGATTCTTTCACAAATACCGTGTGCTCCTCCATCAGCCTTTTCTATCTCCTTACATCCAGCAGGGGTTACTGCCGTTGGTGGCTACGGATGTCTTGTGGATGTAATCTCACAATTTGGCAGCCACATGTGCACATTTCGATGCCAATGTGTTTAG | 1215 | 0.4156 | MGDATNWNEDAYRESVLKEREIQTQTVFRTAWAPSQSQSLIVASSDGSIASYSLPSTITASKLKNVNHSYSYSYSYSIHHFTVFKFKLQIHIYFYLLQPFGFVNADADDLLAEPDCLFQAHHGSAYDVKFYGDDENALLLSCGDDGRIRGWRWKELTSFKYYNISSEGNDIKPVLDVVNPQHKGPWGSLSPLPENNAIAVNTQAGSVFAASGDSCAYCWDVETGKLKTVFKGHSDYLHCIVARNSSNQIITGSEDGTTRIWDCKSGKCIQVIDPAKHLKLKGPVSWVGSVALDASESWLACSSGRNISLWNLPAAECTLNFSTRASVQDLLFDNNQILTVGADPILNRFDMNGAILSQIPCAPPSAFSISLHPAGVTAVGGYGCLVDVISQFGSHMCTFRCQCV | 404 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo1g00461 | 404 | SMART | WD40_4 | 13 | 53 | IPR001680 | GO:0005515 | |
Mepo1g00461 | 404 | SMART | WD40_4 | 111 | 152 | IPR001680 | GO:0005515 | |
Mepo1g00461 | 404 | SMART | WD40_4 | 182 | 220 | IPR001680 | GO:0005515 | |
Mepo1g00461 | 404 | SMART | WD40_4 | 223 | 262 | IPR001680 | GO:0005515 | |
Mepo1g00461 | 404 | SMART | WD40_4 | 273 | 311 | IPR001680 | GO:0005515 | |
Mepo1g00461 | 404 | SMART | WD40_4 | 314 | 350 | IPR001680 | GO:0005515 | |
Mepo1g00461 | 404 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 230 | 262 | - | - | |
Mepo1g00461 | 404 | Gene3D | - | 181 | 401 | IPR015943 | GO:0005515 | |
Mepo1g00461 | 404 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 230 | 271 | IPR001680 | GO:0005515 | |
Mepo1g00461 | 404 | PANTHER | THO COMPLEX SUBUNIT 6 HOMOLOG | 2 | 403 | IPR042626 | - | |
Mepo1g00461 | 404 | Gene3D | - | 7 | 163 | IPR015943 | GO:0005515 | |
Mepo1g00461 | 404 | Pfam | WD domain, G-beta repeat | 225 | 262 | IPR001680 | GO:0005515 | |
Mepo1g00461 | 404 | Pfam | WD domain, G-beta repeat | 280 | 311 | IPR001680 | GO:0005515 | |
Mepo1g00461 | 404 | SUPERFAMILY | WD40 repeat-like | 24 | 390 | IPR036322 | GO:0005515 |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo1g00461 | 201 | 267 | Eukaryotic Initiation Factors Gene Family | AT2G46280 | 31.343 | 3.82e-06 | 46.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo1g00461 | K13175 | K03257 | gmx:100820024 | 628.246 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mepo1g00461 | 1 | 4425445 | 4431753 | Mepo1g00461 | 1 | 4425445 | 4431753 | ECH | |
Mepo1g00461 | 1 | 4425445 | 4431753 | Mepo6g01762 | 6 | 19830999 | 19835389 | PCT |