Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00456 ATGGAACCTCGTGTTGGGAATAAGTTTCGCCTTGGTAGGAAGATCGGCAGTGGTTCCTTTGGGGAGATCTACTTAGGTACTAATATTCAAACTAACGAAGAGGTTGCAATTAAGCTTGAAAATGTCAAGACTAAGCATCCTCAGCTGCTGTACGAGTCCAAGTTGTACAGAATTCTCCAGGGAGGAACTGGAATTCCAAATGTTAGATGGTTTGGAGTAGAGGGAGATTACAATGTTTTAGTGATGGATCTGCTTGGACCTAGTCTTGAAGATCTATTTAACTTTTGTAGTAGAAAGTTATCACTAAAAACAGTTCTCATGCTTGCTGATCAAATGATCAACCGTGTTGAGTTCATTCATTCGAAATCATTTCTACATCGAGATATCAAACCGGATAATTTTCTAATGGGATTAGGAAGGCGTGCGAACCAGGTTTATGCTATTGATTTTGGTCTGGCTAAGAAATACAGAGACAGTTCAACCCATCAACACATTCCTTACAGGGAAAATAAAAATTTGACCGGAACTGCAAGATATGCTAGCATGAATACTCACCTTGGCATTGAACAAAGTCGAAGAGATGATTTAGAGTCTCTTGGTTATGTTTTGATGTACTTCCTGAGAGGGAGTCTTCCTTGGCAGGGACTTAAAGCAGGAACCAAGAAACAGAAGTATGAGAAAATCAGTGAAAAAAAGGTTTCTACATCGATTGAAGCCTTATGTCGGGGTTATCCAACCGAATTTGCATCATACTTCCATTACTGTCGCTCATTAAGGTTTGATGATAAGCCAGATTATGCTTATCTCAAAAGGATATTCCGCGACCTGTTTATCCGTGAAGGATTCCAGTTTGATTATGTGTTTGACTGGACCATCTTGAAGTATCAGCAATCACAGCTTGCCACACCTCCAGCACGGGGCATTGTTCCTGGTGCTGGAACCAGTTCTGCAATGCCACCTGCTGTTACCAATGCTGATAGACATACAGGAGCAGAAGGGCAACCCCCTGGTTTGGTTTCGGTGGATTCCTCGAGGCGCAGAATGTCGGGACCCATTTTGAATACCTTATCAAGTTCCAATGTCTTGGGTCAATCAAGTGGATCATCTAGGCGAGTTGCTGTTTCTAGTAGTCGTGATGCATTTGTTGGTGCTGAGTCAGATGTTCGTACACGCACTGCTGATGCTAGCCCTGGAGCAGCAGCACATAGAATTTTGAGCGGTCAAAGAAGTTCACCAATTGGATCTTCTGATCCCCAAAGAGTAGCACGGGCTGGGAGAAATGCTTCTCAAGCCAATAACTATGAAAGTGCCCTTAGGGGCATGGATGGTTTGCAGTTAGAAAATGATGAGAGAACCCATTATTAA 1365 0.4271 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFIHSKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPARGIVPGAGTSSAMPPAVTNADRHTGAEGQPPGLVSVDSSRRRMSGPILNTLSSSNVLGQSSGSSRRVAVSSSRDAFVGAESDVRTRTADASPGAAAHRILSGQRSSPIGSSDPQRVARAGRNASQANNYESALRGMDGLQLENDERTHY 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00456 454 FunFam Putative Casein kinase I 1 85 - -
Mepo1g00456 454 CDD STKc_CK1_delta_epsilon 8 282 - -
Mepo1g00456 454 MobiDBLite consensus disorder prediction 349 454 - -
Mepo1g00456 454 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Mepo1g00456 454 FunFam Casein kinase I isoform delta-like 1 308 - -
Mepo1g00456 454 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00456 454 MobiDBLite consensus disorder prediction 325 344 - -
Mepo1g00456 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mepo1g00456 454 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Mepo1g00456 454 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00456 454 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00456 454 PANTHER CASEIN KINASE-RELATED 9 394 - -
Mepo1g00456 454 MobiDBLite consensus disorder prediction 349 375 - -
Mepo1g00456 454 Gene3D Transferase(Phosphotransferase) domain 1 1 307 - -
Mepo1g00456 454 MobiDBLite consensus disorder prediction 408 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00456 Mepo-Chr1 4376612 4384884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00456 7 223 EF-hand Containing Proteins AT2G17890 26.667 1.10e-13 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mepo1g00456 Pkinase 9.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00456 K02218 - gmx:100785851 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00456 1 4376612 4384884 Mepo1g00456 1 4376612 4384884 ECH
Mepo1g00456 1 4376612 4384884 Mepo6g01759 6 19804639 19808532 PCT