Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00441 ATGGCCGCTCCGAGAATCCTACTCTGCGGCGACGTTAACGGCCGTCTTAACCAGCTCTTCAAGCGCGTATTATCGGTGAACAAATCCGCAGGCCCATTCGACGCACTCTTATGCGTTGGCCAGTTCTTCCCTGACTCACCGGACCAGCTTGATGAGTTCACCGCATACATTGAAGGTGGTGGATCCCACATTCCCCTCCCTACTTACTTCATCGGCGATTACGGCGTCGCCGCGCCCAAATTTTTGTTGGCGGCTTCTAAAGATTCCGCCAACAGTGGTTTCAAGATGGATGGGTTAAGGGTTTGCGATAATTTGTTTTGGTTGAAAGGCAGTGGAAAATTCAACCTCTTCGGGTTATCAGTCACCTATTTATCTGGTAGGAAATCGTCAACTGGTCAGCAGTTTGGAACTTACAGTGAAGACGATGTTGATGCTTTGCGTGCAATAGCTGAGGAATCTGGAGTTGTTGATATGTTCTTGACTAACGAGTGGCCAAGTGGGGTCACAAATGGAGTAGCTGCTTCAGACATTCCTGCCGGATTCTCAGATTCTACAGGCAGTGATTCAACCATATCAGAGTTAGTACAAGAGATTAAACCACGCTATCATATTGCAGGTTCTAAAGGTATATACTATGCCCGTGAACCATATTCAAATGTTGATGCCGTGCACGTTACTCGTTTCATAGGGCTTGCGTCTGTTGGAAATAAAGATAAGCAGAAATTTATTCATGCAATTTCTCCAACACCTGCATCTACCATGTCTTCAACCGAGATTGCCATGAAAACCACCAATACCACCTTATCACCATACACATTTGCGGGGGGAAAAGCTTCTCCAAAGGATACGGTAAAGAGATCTGGTGACGGTATCTCTGATTCTCAACATTGGAGATACGATGTTCCACAAAAGCGACAGAAACATGAAGCTGGAGACAAGTTGTGTTTCAAATTTGTATCTTCCGGCTCTTGTCAATGGGGAGAGACATGTAATTTTCGACATGACACAGATGCAAGGGAGCACTGTTTGAGAGGTGTTTGTTTTGATTTTCTGAACAAGGGAAAATGTGAAAGGGGCCCAGACTGCCGCTTTAGGCACAGCTTACATGATGAAGGTGATAAGTTTCCTTCCAGGAAGCCTGGATCAGAAAATACAAGGTCTAGCAGATCAAGAGAATGTTGGTTTTGCCTATCAAGTCCCAGTGTGGAGTCGCATTTAATCATAAGCATTGGGGAAAATTCTTATCTAGCATTGGCTAAAGGCCCACTTGTTGAAGACCATGTGCTTATAATACCAGTTGAGCACATGCCAAATACCTTAGCTCTTTCTTCTGAATCTGATGTTGAGCTCTTAAAGTTTCAGAACAGTCTCAAGAAATATTGCAAGAACCAAGAAAAGGAAGTCATATTTTTTGAGTGGGCTTCAATACGTGGAACTCATGCCAATCTTCAGGCCATTCCCATTCCATCTTCCAAAGCAGTTATAGTTGAAAAAGCATTCAATTTAGCTGCAGAGAAGTTGGGATTTAAATTTGTGGCAAAAAAATTCGACAGCATTTCTGATGGAAGAAAGTTTTTGAAGACCCAAATTGATGGGAATTCAAGCTTGTTCTATGCTGAAATCCCAGGAGGCACCATTCTGCTGCACCATGTTGAGGAGAAAGACACTTTTCCCGCCCAATTTGGACGTGAGGTTCTGGCGGGGTTGCTTAATATGGCAGATAACGCCGATTGGAGGAATCGCAAACATAACAAAGATGAAGAGATGAAAATCGTTGAAGATTTCAAGGACCGATTTGAAGAATATGATCCAAACCGTTGA 1821 0.4371 MAAPRILLCGDVNGRLNQLFKRVLSVNKSAGPFDALLCVGQFFPDSPDQLDEFTAYIEGGGSHIPLPTYFIGDYGVAAPKFLLAASKDSANSGFKMDGLRVCDNLFWLKGSGKFNLFGLSVTYLSGRKSSTGQQFGTYSEDDVDALRAIAEESGVVDMFLTNEWPSGVTNGVAASDIPAGFSDSTGSDSTISELVQEIKPRYHIAGSKGIYYAREPYSNVDAVHVTRFIGLASVGNKDKQKFIHAISPTPASTMSSTEIAMKTTNTTLSPYTFAGGKASPKDTVKRSGDGISDSQHWRYDVPQKRQKHEAGDKLCFKFVSSGSCQWGETCNFRHDTDAREHCLRGVCFDFLNKGKCERGPDCRFRHSLHDEGDKFPSRKPGSENTRSSRSRECWFCLSSPSVESHLIISIGENSYLALAKGPLVEDHVLIIPVEHMPNTLALSSESDVELLKFQNSLKKYCKNQEKEVIFFEWASIRGTHANLQAIPIPSSKAVIVEKAFNLAAEKLGFKFVAKKFDSISDGRKFLKTQIDGNSSLFYAEIPGGTILLHHVEEKDTFPAQFGREVLAGLLNMADNADWRNRKHNKDEEMKIVEDFKDRFEEYDPNR 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00441 606 SUPERFAMILY CCCH zinc finger 312 338 IPR036855 GO:0046872
Mepo1g00441 606 Gene3D - 304 382 - -
Mepo1g00441 606 ProSiteProfiles Zinc finger C3H1-type profile. 346 369 IPR000571 GO:0046872
Mepo1g00441 606 PANTHER CWF19, CELL CYCLE CONTROL PROTEIN 5 605 IPR040194 -
Mepo1g00441 606 ProSiteProfiles Zinc finger C3H1-type profile. 309 337 IPR000571 GO:0046872
Mepo1g00441 606 Pfam Protein similar to CwfJ C-terminus 1 386 500 IPR006768 -
Mepo1g00441 606 MobiDBLite consensus disorder prediction 282 304 - -
Mepo1g00441 606 Gene3D - 387 508 IPR036265 -
Mepo1g00441 606 CDD MPP_CWF19_N 7 234 - -
Mepo1g00441 606 MobiDBLite consensus disorder prediction 271 304 - -
Mepo1g00441 606 SUPERFAMILY HIT-like 389 464 IPR036265 -
Mepo1g00441 606 SMART c3hfinal6 311 336 IPR000571 GO:0046872
Mepo1g00441 606 SMART c3hfinal6 343 368 IPR000571 GO:0046872
Mepo1g00441 606 Pfam Protein similar to CwfJ C-terminus 2 515 603 IPR006767 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mepo1g00441 CwfJ_C_1 7.7e-36 CL0265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00441 K24939 - gmx:100782106 1043.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00441 1 4226873 4232143 Mepo1g00441 1 4226873 4232143 ECH