Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00431 ATGTCAATACCGACCAAGACGGCTCAACTTCAACTTCAACTTCAACAACAATACTTTCTTCTAACAATGCCTCGTAGATTACTTCAACTCCAAGAGACACCTCCTTCCTCCTCATCCTCTTCCTCGCCACACCACGCCTCCGGAGCTTTGTACTTTTTCCTTGGAGGGATCGTAGTGCTTGTCATATTGCTCATTCTTCTCTTTGTATTTTGGAAGCGTATTAGACGTGGCAGTGGCAAAACAGAAGAACTACCGGAGGAGACAGCTCCACCACCTAGTCAGACACAGAAGCAAGAAGAGGTGATGAAGAGGATTATCCCAACTAATCAACAGTCAGGATTCATGGAGTTCATTAGTGGGAATCTTAGGACAATTAGCTACTTTGATTTCCAGACATTGAGAAAAGCCACCAAGAATTTCCACCGCAGATATCTTCTTGGAAGTGGTGGATTTGGCCCTGTCTATCAGGGAAAGTTGGCAGATGGAAGGCTAGTTGCTTGTAAGAAATTGTCTCTTGACAAATCTCACCAAGGAGAAAGAGAATTTCTAGCAGAAGTTAGAATGATCACAAGCATCCAGCATAAAAATCTTGTTCGCCTTCTCGGATGTTGCTCAGATGGACCTCAAAGAATACTTGTTTACGAATACATGAAGAACAGAAGTTTGGACTTCTTTATACATGACCAAGCTTACCTTAGCACTCAGTTTGCCGGAACATTAGGTTATACAGCTCCTGAATATGCAATTAGAGGAGAATTATCTGAAAAGGCAGACATCTATAGTTTTGGAGTTCTTTTGCTTGAAATCATCAGCTGCAGAAGAAACACAGATCTCACTTTACCATCAGATATGCAGTACCTACCAGAATATGCATGGAAACTTTATGAGAAGTCAATGGTAATGGAACTTATAGATCCAAAGCTGATAGAAAAAGGATATGTAGAAAAAGATGTTATGCAAGCATTCCATGTGGCCTTTTTATGCCTTCAGCCACATCCAGATTTAAGACCTGCTATGTCACAGATTGTAGCATTGTTAACATTTAAAATTGACATGGTTACAACACCAATGAGGCCAGCTTTCCTTGATCGAAGGCGCGTAATGGACGATGAGAATCATTCTTGGGAAGTCATATCTGAGGTTTTACAAACTCCTGTGGCTAGTGATTCTACGTTATAA 1179 0.4105 MSIPTKTAQLQLQLQQQYFLLTMPRRLLQLQETPPSSSSSSSPHHASGALYFFLGGIVVLVILLILLFVFWKRIRRGSGKTEELPEETAPPPSQTQKQEEVMKRIIPTNQQSGFMEFISGNLRTISYFDFQTLRKATKNFHRRYLLGSGGFGPVYQGKLADGRLVACKKLSLDKSHQGEREFLAEVRMITSIQHKNLVRLLGCCSDGPQRILVYEYMKNRSLDFFIHDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLLLEIISCRRNTDLTLPSDMQYLPEYAWKLYEKSMVMELIDPKLIEKGYVEKDVMQAFHVAFLCLQPHPDLRPAMSQIVALLTFKIDMVTTPMRPAFLDRRRVMDDENHSWEVISEVLQTPVASDSTL 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00431 392 Gene3D Phosphorylase Kinase; domain 1 99 211 - -
Mepo1g00431 392 Pfam Protein tyrosine and serine/threonine kinase 238 345 IPR001245 GO:0004672|GO:0006468
Mepo1g00431 392 Pfam Protein tyrosine and serine/threonine kinase 145 229 IPR001245 GO:0004672|GO:0006468
Mepo1g00431 392 SUPERFAMILY Protein kinase-like (PK-like) 126 369 IPR011009 -
Mepo1g00431 392 Gene3D Transferase(Phosphotransferase) domain 1 212 355 - -
Mepo1g00431 392 MobiDBLite consensus disorder prediction 80 100 - -
Mepo1g00431 392 ProSiteProfiles Protein kinase domain profile. 140 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00431 392 FunFam Cysteine-rich receptor-like protein kinase 10 104 216 - -
Mepo1g00431 392 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 28 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00431 Mepo-Chr1 4143189 4146236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00431 128 364 Receptor kinase-like Gene Family AT4G05200 31.579 1.39e-37 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo1g00431 PK_Tyr_Ser-Thr 7.7e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00431 - - ccaj:109792436 294.278