Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00423 ATGGGGAACTGCTTGACTACAAGCCTTCAATCCTCAGCCGATCATCCCAACTCCAGTACTGTCCCTGACAACAACAATCAATCAGGGAGTATTCTGTTTTCTTCTGGTCTAAGCAACTTAAGATTGATAAGGAATGGCAATTCAACATCTGTTGGGCGTAGCAACAACTCTGGAGGAAATAGCAGACTATTCAGTAGTAGTAATAATCACTCAACAGGCAATAATACAAGTACATCCTTCTGGGGCTCTGAGAATAGCCTGGCCTCTCGAGTAAGACAAGAGGAGGAGTTTCCTCATGGGCAGATCTTGGATGCTGCCAACTTGAAAGTTTTTACTTGGGCAGAACTGAAATCAGCTACTAGAAATTTTCGTGCTGAAAATGTGGTAGGAGAGGGCGGGTTTGGTAAAGTATTCAAGGGTTTGATTAATAAGGAGGGATCAGAATCAAAAAAAGGTGAGGGTTTGACTATTGCCATCAAGATATTGAAATCTGACAGCATGCAAGGATATCAGGAATGGCAGTCAGAGGTGAATTTCTTAGGAAGGCTTTCTCATCCCAACCTTGTAAAGCTGTTGGGATTTGGGCGTGAGGATGATAAGCTATTTCTGGTGTATGAATTTATGCCTCGCGGTAGCTTGCATAACCACCTATGTGGAAGAGGTTCAAATGTTCAGCCACTTTCATGGGACAGAAGGCTGAAAGTAATGATTGGAGCAGCCAGGGGACTAAATTTTCTTCACTCGGAGAAGACAATTATATACAGAGATTTCAAGTCCTCAAATATACTACTTGACAAGGCATACACAGCCAAGTTATCAGACTTTGGCATGGCTAAATCTGGTCCTTCTGATGATCACACTCATGTATCAACACGAGTTATGGGAACATGCGGCTATGCCGCTCCAGAATATATTGCCACAGGCCATTTGTCCGTGAAAAGTGATGTGTATGGATTTGGGATTGTTTTGTTGGAGATATTAACAGGTAAGGGGATAAATGGGATAATACGCCTGAGTAAGTCAAAGTCCTTATGTGACTGGCTCAAATCAAACCTGTTAAATAGAGCAAAATCGAGAAGCAATATGGATCCAAAGTTGGAAGGCAAGTATCCACCCAACTTAGCTTCACAAATAGCTCAACTTTCTCTCAAATGCATACAAACAAACCCCAAAATTAGGCCATCAATGAAGGAAGTTGTTGAAACATTGGAAAGTATCGAAGCGGCCAATGAGAAACCGGCTGATAATATAAAGAAGACTATTAACTCCAAGGCAGTTCAACAACATGGCCAACCAGATGGTGGTTGA 1308 0.4205 MGNCLTTSLQSSADHPNSSTVPDNNNQSGSILFSSGLSNLRLIRNGNSTSVGRSNNSGGNSRLFSSSNNHSTGNNTSTSFWGSENSLASRVRQEEEFPHGQILDAANLKVFTWAELKSATRNFRAENVVGEGGFGKVFKGLINKEGSESKKGEGLTIAIKILKSDSMQGYQEWQSEVNFLGRLSHPNLVKLLGFGREDDKLFLVYEFMPRGSLHNHLCGRGSNVQPLSWDRRLKVMIGAARGLNFLHSEKTIIYRDFKSSNILLDKAYTAKLSDFGMAKSGPSDDHTHVSTRVMGTCGYAAPEYIATGHLSVKSDVYGFGIVLLEILTGKGINGIIRLSKSKSLCDWLKSNLLNRAKSRSNMDPKLEGKYPPNLASQIAQLSLKCIQTNPKIRPSMKEVVETLESIEAANEKPADNIKKTINSKAVQQHGQPDGG 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00423 435 Pfam Protein tyrosine and serine/threonine kinase 126 403 IPR001245 GO:0004672|GO:0006468
Mepo1g00423 435 PANTHER OS01G0588500 PROTEIN-RELATED 68 407 - -
Mepo1g00423 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Mepo1g00423 435 Gene3D Transferase(Phosphotransferase) domain 1 208 430 - -
Mepo1g00423 435 SUPERFAMILY Protein kinase-like (PK-like) 105 403 IPR011009 -
Mepo1g00423 435 FunFam Serine/threonine-protein kinase BIK1 89 207 - -
Mepo1g00423 435 ProSiteProfiles Protein kinase domain profile. 123 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00423 435 ProSitePatterns Protein kinases ATP-binding region signature. 129 160 IPR017441 GO:0005524
Mepo1g00423 435 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 208 416 - -
Mepo1g00423 435 Gene3D Phosphorylase Kinase; domain 1 107 207 - -
Mepo1g00423 435 MobiDBLite consensus disorder prediction 1 27 - -
Mepo1g00423 435 MobiDBLite consensus disorder prediction 48 80 - -
Mepo1g00423 435 MobiDBLite consensus disorder prediction 414 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00423 Mepo-Chr1 4087367 4090489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00423 109 403 Glycoside Hydrolase AT3G07070 43.434 2.86e-84 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo1g00423 PK_Tyr_Ser-Thr 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00423 - - gmx:100813304 587.03