Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00422 ATGGTTGTAGATCCGGTAGTGATTCCAAAGATGAGGATGGATGAACAAAGAGCTATTCAAGAAGCTGCTTCTGCTGGATTGAAAAGTATGGAGCAACTAATTCGTGTGCTTTCTTCTCAAACTTCATCTTCTTGTTCTTCAAATCAACTAGATCTGCTCAATAAACTTGATTGCACTGAAATTACTGATTTCACTGTTTCTAAGTTTAAAACGGTTATTAACTTGTTAAATCGTACCGGTCACGCTCGTTTTCGTCGTGCACCTTCTTCTTGTTCTTCTCAATCTCAATCTCAATCTCAATCTCAATCTCATGTTCAACCTCAGAAATTCAACACTCAACCACAGTCAACTACTCTTGATTTTGCAAAACCGATCCAATTCGTTAAGTCAAATCTAAATCCAAATCCCAATCTCAATCCCAATCTCAAACCTAAAACTAATCAATCTGCTGATTTATCTGTTTCTCAATACTCTAAATCAAAGGAAGCATATAGCAGCATCTCCACCACTACTTCGTCTTTCATGTCCTCCATCACCGGAGACGGAAGCGTTTCCGACGGTAAAATCGGTCCTATCATTTCCTCCGGCAAGCCACCTCTTGCTTCATCTCACCGAAAAAGGTGTCACGAAGCTACTACAATCTCCGGTAAAGTCTCATCCTCCGGTCACTGCCATTGCTCTAAGAGAAGGAAATCTCGTGTGAAGAGAACAATTCGTGTTCCGGCGATAAGTTCAAAGGTCGCTGATATACCATCAGACGAATTTTCGTGGAGGAAATACGGTCAAAAACCTATTAAAGGTTCACCTTACCCACGTGGTTACTACAAGTGCAGTAGCTTCAAAGGATGTCCGGCGAGGAAGCATGTAGAAAGAGCACAAGACGATCCCAATATGCTTGTTGTTACCTACGAAGGAGAGCACCGTCACGCGCAAACCGTCGTTACCGGCGCCGGATTCATATCTCAGCCTCTTTGA 975 0.4246 MVVDPVVIPKMRMDEQRAIQEAASAGLKSMEQLIRVLSSQTSSSCSSNQLDLLNKLDCTEITDFTVSKFKTVINLLNRTGHARFRRAPSSCSSQSQSQSQSQSHVQPQKFNTQPQSTTLDFAKPIQFVKSNLNPNPNLNPNLKPKTNQSADLSVSQYSKSKEAYSSISTTTSSFMSSITGDGSVSDGKIGPIISSGKPPLASSHRKRCHEATTISGKVSSSGHCHCSKRRKSRVKRTIRVPAISSKVADIPSDEFSWRKYGQKPIKGSPYPRGYYKCSSFKGCPARKHVERAQDDPNMLVVTYEGEHRHAQTVVTGAGFISQPL 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00422 324 MobiDBLite consensus disorder prediction 86 115 - -
Mepo1g00422 324 Pfam WRKY DNA -binding domain 253 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g00422 324 ProSiteProfiles WRKY domain profile. 246 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g00422 324 FunFam WRKY transcription factor 65 235 312 - -
Mepo1g00422 324 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 17 312 IPR044810 GO:0003700
Mepo1g00422 324 SMART WRKY_cls 251 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g00422 324 SUPERFAMILY WRKY DNA-binding domain 249 310 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo1g00422 324 Gene3D WRKY domain 237 312 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo1g00422 324 Pfam Plant zinc cluster domain 205 249 IPR018872 -
Mepo1g00422 324 MobiDBLite consensus disorder prediction 129 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00422 Mepo-Chr1 4061460 4063052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00422 1 314 WRKY Transcription Factor Family AT2G24570 50.305 7.62e-96 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo1g00422 WRKY 1.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00422 - - gmx:732587 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00422 1 4061460 4063052 Mepo1g00422 1 4061460 4063052 ECH
Mepo5g00699 5 6704330 6706288 Mepo1g00422 1 4061460 4063052 PCT