Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00400 ATGTGTCAGTCTGTGAACAAAGCTAATTATCAAGTAGGAGACTTAGTCGAAGTTTGCAGCAAAGATGAAGGGTTTTGGGGCTCGTACTTCGAGGCCAAAATTGTTGGATGCCTTAAGAATGGGAAATATGTGGTTCGTTACAAGGACCTTCTTGAGGATGACAAATTTGGACCTCTCGAGGAGACACTTTTATCAAAGGACCTTCGTCCAATGCCGCCATGTGTCCAAAATCCTCCCGAGTTCCAACTTAACCAAAAAGTTGATGTTTTCTGCAAAGATGGATGGTGGTTAGGGAAAATCATTGGCAAGAAGGAATTCAAGAAAAAGAAGTATAAAATTAGTGTGTACTTTCCCACTATCCCTCGAAAGAGATTATGTTGTTGTGATCAAATTCGAGTTCATCATGAGTTGTCTGGAGGAGAATGGATCACAAAACCTTAA 441 0.4059 MCQSVNKANYQVGDLVEVCSKDEGFWGSYFEAKIVGCLKNGKYVVRYKDLLEDDKFGPLEETLLSKDLRPMPPCVQNPPEFQLNQKVDVFCKDGWWLGKIIGKKEFKKKKYKISVYFPTIPRKRLCCCDQIRVHHELSGGEWITKP 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00400 146 CDD Tudor_Agenet_AtDUF_rpt1_3 10 73 - -
Mepo1g00400 146 Gene3D - 3 73 - -
Mepo1g00400 146 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 9 144 - -
Mepo1g00400 146 SMART agenet_At_2 8 76 IPR014002 -
Mepo1g00400 146 SMART agenet_At_2 79 139 IPR014002 -
Mepo1g00400 146 Pfam Agenet domain 13 73 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00400 Mepo-Chr1 3873606 3874046 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00400 20 120 PHD Transcription Factor Family AT5G58610 28.455 6.72e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00400 - - mtr:11418635 275.789