Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00398 ATGTCTTCGTGTTTTAGTGGAACAGGTGGAAGAACCATCGGGTTGGATTTAGATATAGTTAAATCATCACCACCATGTTCATGGAGTAGAACATCACAAACATCTTCTTCACCTTCTTCAACAATCTCTGAATCAAGCAATTCACCACTTGCAATTTACACCACAAAACCCAGAACCCCGAGAAAACGACCCAATCAAACCTACAACGAAGCTGCAACACTTCTTAACACCGCATACCCAAACCTCTTCTCCAATCCCAATCTCAATCTCAAAACAAACCCCAACAATAATAAACTCACCAAATCAGAAAAAACTTATGAATTCGACACTTCTGAACTTCTTTTACCTTTCAGAGTATTGGACACATCATCATCTTTTTTACTTCACGGCAAGCCCGATTTCCCTTCGGAGCCAAAACCGGTGAAACCGTGTCAGAGTCCCGGAGAGATTAGTTCAATGGTGAATTGTCTTGAATTGAACGATGATGATGATGATTTTGACGCGGAATCGATACTCGACGAGGAAATTGAAGAAGGAATAGATAGCATCATGGGAGGTAGAATTGAGGAAAATGAATCTAATGTCTCTTCTTCTCATCCATGGATTGGTTTTGGCGGGAAATTCGATTTCCGGTTAGGATTACAGAGAGGTGGAGTGAGAGCTCTTCGTCATGTTGATGAAGGTAATTGGTGGAATTTTCCGGCGGTTGATATGCTTAAAATTTTGCCCAAAATATGCAGTGTCGGTGGTGGTAAGACTGAGAAGAAGAAAAAGAAGAAGGTTGTTGCGGTGGAGAGACTGAATGCAGAATTGAAAGAAATGGAATCGCCAAAGTTGAAAAGTGGATTGTTGTTGAAATTGAATTACGACGGTGTTCGGAAAGCTTGGTCTGACCGAGGAACACCGTTCGCCGATGACAGCCCTGTCTCCGATGCTTCGGGAAATGATGTTAATGCACGGCTGTCACAAATAGATTTGTTATGGGAGAATGGAGGAGGAGGAAGTGGTGTAAGAGAAGCCAGCGTGCTGCGTTACAAAGAAAAGCGTCGTACACGCCTCATCTCTAAGAAAATCAGATATCAAGTTAGGAAGGTCAATGCAGATCGACGGCCAAGAATGAAGGTATGA 1128 0.4255 MSSCFSGTGGRTIGLDLDIVKSSPPCSWSRTSQTSSSPSSTISESSNSPLAIYTTKPRTPRKRPNQTYNEAATLLNTAYPNLFSNPNLNLKTNPNNNKLTKSEKTYEFDTSELLLPFRVLDTSSSFLLHGKPDFPSEPKPVKPCQSPGEISSMVNCLELNDDDDDFDAESILDEEIEEGIDSIMGGRIEENESNVSSSHPWIGFGGKFDFRLGLQRGGVRALRHVDEGNWWNFPAVDMLKILPKICSVGGGKTEKKKKKKVVAVERLNAELKEMESPKLKSGLLLKLNYDGVRKAWSDRGTPFADDSPVSDASGNDVNARLSQIDLLWENGGGGSGVREASVLRYKEKRRTRLISKKIRYQVRKVNADRRPRMKV 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00398 375 ProSiteProfiles CCT domain profile. 338 375 IPR010402 GO:0005515
Mepo1g00398 375 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 18 374 - -
Mepo1g00398 375 Pfam CCT motif 338 374 IPR010402 GO:0005515
Mepo1g00398 375 MobiDBLite consensus disorder prediction 24 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00398 Mepo-Chr1 3855335 3857779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00398 280 374 C2C2-CO-like Transcription Factor Family AT1G73870 44.444 1.89e-17 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo1g00398 CCT 5e-12 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00398 - - aprc:113845796 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00398 1 3855335 3857779 Mepo1g00398 1 3855335 3857779 ECH
Mepo1g00398 1 3855335 3857779 Mepo6g01678 6 18781114 18782540 PCT