Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00381 ATGCAGAAACTAAATAAGTTGGCTGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCAACATTAAAATTACCTTCTGGAGAGGTTCGTTTGATATCAAAAAACTGCTCAGCAACAGTAGGACAAGTAGGGAATGTTGGAGTAAACCAAAAAAGTTTGGGCAGAGCCGGAGCTAAACGTTGGTTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCACCCACATGGTGGTGGTGAAGGGAGGGCCCCGATTGGTAGAAAAAAACCCTCAACTCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAAGAATAAATATAGTGATAATTTGATTCTTCGTCGCCGTAGTAAATAG 381 0.4278 MQKLNKLAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGAKRWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPSTPWGYPALGRRSRKKNKYSDNLILRRRSK 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00381 126 Gene3D - 1 46 IPR014722 -
Mepo1g00381 126 ProSitePatterns Ribosomal protein L2 signature. 68 79 IPR022671 GO:0003735|GO:0005840|GO:0006412
Mepo1g00381 126 NCBIfam 50S ribosomal protein L2 3 125 IPR005880 GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740
Mepo1g00381 126 FunFam 50S ribosomal protein L2 46 126 - -
Mepo1g00381 126 Pfam Ribosomal Proteins L2, C-terminal domain 3 101 IPR022669 GO:0003735|GO:0005840|GO:0006412
Mepo1g00381 126 Gene3D Ribosomal protein L2, domain 3 47 125 IPR014726 -
Mepo1g00381 126 MobiDBLite consensus disorder prediction 110 126 - -
Mepo1g00381 126 PANTHER RIBOSOMAL PROTEIN L2 3 125 IPR002171 GO:0003735|GO:0005840|GO:0006412
Mepo1g00381 126 SUPERFAMILY Translation proteins SH3-like domain 4 123 IPR008991 -
Mepo1g00381 126 MobiDBLite consensus disorder prediction 74 126 - -
Mepo1g00381 126 SMART Ribosomal_L2_C_2 3 103 IPR022669 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00381 Mepo-Chr1 3672130 3672835 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00381 4 85 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 44.944 8.97e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00381 K02886 - sly:16976780 233.032