Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00368 ATGAGGTATATTAGAACAGGCAGCTTCAAGAGGCTCTTCTCATTTACCAAACGTGGTTTAGGGGAACCAGTTCTGAGTCCCAAAGGTGAAGAAAACGAAAAGAACTTGAAGATTCTTCCATATGAAGAAGAACCTTGTCAAAGACCAACATGGAAATGTTTCTCTTATGAAGAGTTGTTTGATGCTACCAATGGCTTCAACTCAGAAAATATGGTTGGAAAAGGTGGTTATGCTGAGGTTTACAAAGGAACATTGAAAAATGGTGAAGAAATTGCTGTGAAGAGATTAACAAGGGCTTCAAAGGATGAAAGAAAGGAGAAAGAGTTTTTGACTGAGATTGGAACAATTGGTCATGTTCGTCATTCCAATGTTTTGTCTCTTCTAGGATGTTGTATTGACAATGGACTTTACTTTGTTTTTGAACTATCCACAACTGGTTCTGTTTCATCTATTCTTCATGATGAAAAGTTGGCTCCTTTAGATTGGAAAACAAGACATAAAATAGTTCTTGGGACAGCGCGTGGACTACACTACTTGCACAAAGGTTGCAAGAGGAGAATAATTCATAGAGATATCAAGGCATCAAACATTTTATTGACAAAAGATTTTGAACCACAGATATCTGATTTTGGACTAGCAAAATGGCTTCCATCACAATGGACTCATCACTCAATTGCTCCAATAGAAGGGACATTTGGACATTTGGCACCAGAATACTACTTGCATGGAGTTGTGGATGAGAAAACAGATGTATTTGCTTTTGGTGTGTTCTTGCTAGAAGTCATTTCTGGTAGGAAACCTGTGGATGTGTCTCACCAAAGTTTACATAGCTGGGCTAAACCAATTTTGAACAAAGGTGATATAGAAGAGCTGGTAGATGCAAGGCTTGAAGGAGCTTATGATGTAACAGAGTTAAAGAGACTTGCCTTTGCTGCCTCTCTATGCATCCGGGCATCTTCTACTTGGCGACCCTCCATGACTGAGGTATTAGAGATAATGGAGGAGGGAGAGATGGATAAAGAGAAGTGGAAAATGCCAGAGGAAGAAGAAGAACAAGAGGAAGAGTTCTGGGGTTTTGAGGATCTCGAATATGAATATGACAGTTCATTTTCAATGTCTTTAATTGATTCAATTGAAAGTAATTAA 1146 0.3866 MRYIRTGSFKRLFSFTKRGLGEPVLSPKGEENEKNLKILPYEEEPCQRPTWKCFSYEELFDATNGFNSENMVGKGGYAEVYKGTLKNGEEIAVKRLTRASKDERKEKEFLTEIGTIGHVRHSNVLSLLGCCIDNGLYFVFELSTTGSVSSILHDEKLAPLDWKTRHKIVLGTARGLHYLHKGCKRRIIHRDIKASNILLTKDFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYYLHGVVDEKTDVFAFGVFLLEVISGRKPVDVSHQSLHSWAKPILNKGDIEELVDARLEGAYDVTELKRLAFAASLCIRASSTWRPSMTEVLEIMEEGEMDKEKWKMPEEEEEQEEEFWGFEDLEYEYDSSFSMSLIDSIESN 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00368 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Mepo1g00368 381 SUPERFAMILY Protein kinase-like (PK-like) 43 333 IPR011009 -
Mepo1g00368 381 Gene3D Transferase(Phosphotransferase) domain 1 144 359 - -
Mepo1g00368 381 ProSitePatterns Protein kinases ATP-binding region signature. 72 94 IPR017441 GO:0005524
Mepo1g00368 381 FunFam Putative receptor-like serine/threonine-protein kinase 33 142 - -
Mepo1g00368 381 SMART serkin_6 66 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00368 381 Pfam Protein tyrosine and serine/threonine kinase 69 330 IPR001245 GO:0004672|GO:0006468
Mepo1g00368 381 ProSiteProfiles Protein kinase domain profile. 66 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00368 381 FunFam Putative receptor-like serine/threonine-protein kinase 144 358 - -
Mepo1g00368 381 PANTHER OS08G0249100 PROTEIN 42 363 IPR046958 -
Mepo1g00368 381 Gene3D Phosphorylase Kinase; domain 1 38 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00368 Mepo-Chr1 3531510 3536068 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00368 54 338 Trihelix Transcription Factor Family AT1G70460 44.407 6.84e-73 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mepo1g00368 PK_Tyr_Ser-Thr 2.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00368 - - gmx:100819499 635.565