Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00363 ATGGACAAATCCTCTTCTTCACCCCCTACAAACACTAACAACACCTCCCTCGCTTTCTCTCTTTCCAATAATAACTTTCCTAATCCTTCACACTCTTCTTCCTCTCACATCTCTCTTTTCCACTCCTTCACCCCTTATCCTTGCTCTATAATACCACCATCTCTCACCCTCACAGGAAGCAGCAACGCCGTGGAAGCTTCACCAGAGGCAACAAACGGAGGAACCACCAACCTCTCCATATTCACCGGCGGCCATAATAAGTTCGAGGACTTCTTAGGAAGCTCCGTTGCACCAACAAGAACCGCCGCCGCAACTTGTGCACCCACACAGCTTCAGCAGTTTTCCACCGACAATGATGTATATAATTCCGAGCTGAAGAAAACAATAGCTGCTTGCTTCCCTGGTGGCTACCCCACCGAACCAAACTCCGAACCTCAAAAGCCTTCTCCTAAGAAAACCGTCGATAGCTTCGGACAACGGACCTCCATCTATCGCGGTGTCACCAGACATAGATGGACGGGGAGATATGAAGCACATCTATGGGACAATAGTTGCAGAAGGGAAGGACAAAGTAGGAAAGGAAGACAAGGTACTATAATTTTTGTTTTTTGTTATAATTTAGGTGGCTATGATAAGGAAGAGAAAGCAGCTAGAGCTTATGATCTTGCTGCTCTCAAGTACTGGGGTCCAACGACCACTACCAACTTTCCGATTTCCAACTATGAGAAGGAGATTGATGACATGAAGAACATGACTAGACAAGAATTTGTTGCTTCTCTACGAAGGAAGAGTAGTGGTTTCTCAAGAGGAGCATCAATTTACAGAGGGGTAACAAGACACCACCAGCATGGCCGATGGCAGGCAAGAATAGGCAGAGTTGCCGGAAACAAAGACCTCTACCTTGGCACTTTCAGCACTCAAGAAGAAGCTGCAGAAGCCTATGATATTGCAGCAATCAAATTTAGAGGACTAAATGCAGTAACAAATTTTGACATGAGTCGGTACGATGTAAAGAGTATTGCAAATAGTTCTCTTCCCATAGGAGGTTTATCAAACAAGAACAACAAAAATTCCACAGATTCTGTATCAGAAACCAAAATCAACGAACCAATTCAATCCGAAGAAATAGATCATCCATCTTCAACTTCGTCGGCAACAACTTTAAGCTTCGCCTTACCTATTAAACAAGACCCTTCAACCGATTATTGGTCCAATATTCTCGGCTTCCATAATAATCCTAGTGCTGTTACTACCACACCATTCAACATGGATTTTTCTGCTCATGCACCTTCAAATACCAACAGTGATAATCACAATGCAGCATTTTTCAGTGGATCAGGTATATTTGTTCAACAACAAAATATGAACGGAAGCAGTGGTTCGAATTCTTCATCTTCGTCGTCAGCTTCAACGGGTTCAATTCCATTTGCCACGCCAATATTTTCTTTAAATAGTAATAGTAGTAGTTATGAGAATGGTACTAGTTACGGAAATGGAAATAACTGGATTGGACACACATTCCAAAATCATGCAAAGCCAAGTCTGTTTCAAACGCCAATATTTGGAATGGAATGA 1575 0.4273 MDKSSSSPPTNTNNTSLAFSLSNNNFPNPSHSSSSHISLFHSFTPYPCSIIPPSLTLTGSSNAVEASPEATNGGTTNLSIFTGGHNKFEDFLGSSVAPTRTAAATCAPTQLQQFSTDNDVYNSELKKTIAACFPGGYPTEPNSEPQKPSPKKTVDSFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGTIIFVFCYNLGGYDKEEKAARAYDLAALKYWGPTTTTNFPISNYEKEIDDMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIANSSLPIGGLSNKNNKNSTDSVSETKINEPIQSEEIDHPSSTSSATTLSFALPIKQDPSTDYWSNILGFHNNPSAVTTTPFNMDFSAHAPSNTNSDNHNAAFFSGSGIFVQQQNMNGSSGSNSSSSSSASTGSIPFATPIFSLNSNSSSYENGTSYGNGNNWIGHTFQNHAKPSLFQTPIFGME 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00363 524 ProSiteProfiles AP2/ERF domain profile. 163 237 IPR001471 GO:0003700|GO:0006355
Mepo1g00363 524 MobiDBLite consensus disorder prediction 136 156 - -
Mepo1g00363 524 CDD AP2 162 239 IPR001471 GO:0003700|GO:0006355
Mepo1g00363 524 MobiDBLite consensus disorder prediction 346 384 - -
Mepo1g00363 524 SUPERFAMILY DNA-binding domain 272 333 IPR016177 GO:0003677
Mepo1g00363 524 CDD AP2 272 333 IPR001471 GO:0003700|GO:0006355
Mepo1g00363 524 FunFam AP2-like ethylene-responsive transcription factor 272 333 - -
Mepo1g00363 524 SUPERFAMILY DNA-binding domain 162 239 IPR016177 GO:0003677
Mepo1g00363 524 Pfam AP2 domain 273 323 IPR001471 GO:0003700|GO:0006355
Mepo1g00363 524 Pfam AP2 domain 163 229 IPR001471 GO:0003700|GO:0006355
Mepo1g00363 524 PRINTS Ethylene responsive element binding protein signature 164 175 IPR001471 GO:0003700|GO:0006355
Mepo1g00363 524 PRINTS Ethylene responsive element binding protein signature 219 239 IPR001471 GO:0003700|GO:0006355
Mepo1g00363 524 Gene3D AP2/ERF domain 163 239 IPR036955 GO:0003700|GO:0006355
Mepo1g00363 524 Gene3D AP2/ERF domain 273 333 IPR036955 GO:0003700|GO:0006355
Mepo1g00363 524 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 113 438 - -
Mepo1g00363 524 FunFam AP2-like ethylene-responsive transcription factor ANT 162 239 - -
Mepo1g00363 524 SMART rav1_2 163 243 IPR001471 GO:0003700|GO:0006355
Mepo1g00363 524 SMART rav1_2 273 337 IPR001471 GO:0003700|GO:0006355
Mepo1g00363 524 ProSiteProfiles AP2/ERF domain profile. 273 331 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00363 Mepo-Chr1 3449770 3453146 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00363 119 524 AP2-EREBP Transcription Factor Family AT5G57390 56.492 4.45e-145 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Mepo1g00363 AP2 1.9e-06 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00363 K09285 - gmx:100803558 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00363 1 3449770 3453146 Mepo1g00363 1 3449770 3453146 ECH