Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00347 ATGGATAGTGATGAGGAGTGCTCAATTGTTCTTGAGTTATCTGAAAATGATCCTTTCTTTGATGAAAAGAAGAAATTACTACGATGTAAGGGGTTTGGTCCCAAGGAACGGATACATCTCAAGTGCTCCTCGGGACCTTCTTTGATGAATGATACCGTAAAGATCTTACTTCAGATTGCAAGAATCATACAGTTAAATGAGCTGGAACTCTATTTTGCTGAAGATGATGCCTCGGTGGAGTTTTACAGCCCCAGGAATGAGTTGGAGGCTCTCAATTCAATTGTTTCGCTCACCGACAAATCACTTTCTAGTTGTCCACATTTCCATACAAACGTCCTGCAAGGGTTACAGCAAAAGATTCTTGATTTAATTTCTGATTTTGGGGACCAAAACAATATGAAGGGAGTACTTGAAAAGTACCACAGTTGTGAGAGAGAAGAACACCTGATTGAGTGGGGTAAAAGCCATGGTGTAAAGACAGGATTAAAGATAGCTTATGTTGAAGGAGCAGGTCGGGGAATGATAGCAGGGAAAGATCTAAAAGTTGGAGATATTGCTATAGAGATTCCCGTGTCCATTATCATTTCCGAGGAGCTTGTGCTTGAAACTGATATGTATCGTCTCTTGAAAGAGGTTGATGCCATATCATCTGAGACAATATTGCTGTTATGGAGTATGAAAGAGAAGTACAACTGTGATTCAAAATTCAAAATTTACTTTGACACACTTCCAGAAAAATTTAATACAGGATTGAGTTTTGGGATTGAAGCGATTACAATGCTAGATGGAACCTTGCTGTTTGAAGAGATAATGCAATCAAGACAGCACTTACATGCTCAGTATGATGAGTTGGTTCCTGCTTTGTGCAATGGTTTTCCTGATATATTTCCTCCAGAGATTTACACTTGGGATAATTTTTTATGGGCTTGTGAACTTTGGTATTCCAATAGCATGAAGATAATGTATTCAGATGGAAAACTGAGGACATGTTTGATACCTCTTGCTGGCTTTCTTAATCATTCACTGTGCCCACATATTACACACTATGGCAAAGTAGATCCTTCAACAAATTCATTGAAATTTTGTCTATCAAGACCATGCCGATCTGGAGAAGAATGCTGCTTAAGCTATGGGAACTTCTCCAGCTCTCATTTTATTACATTTTATGGCTTCTTACCTCAAGGAGACAACCTGTATGATGTCATTCCTTTAGATATCGATAGTTCTGATGTTGATTCTATTGAGGATAAACCTGTGTCCAACTGGACGACTCACATGGTGTGTGGTACCTGGCTCTCCAACAATCACAGCATATTCTATTATGGTCTTCCCTCTCCATTATTGGATCATCTTCGGAGATCTCGAAGTCCTGTGATGCAAACAAAGACTTTCTTGCAAGGAAACTTGGAAAATGAGCTAGAAGTTCTTGGAGATCTCAAAGACATCTTTGACGACATGATGGACAGTATGGGTGAAGTCGATCTTGATAACAGAGAAAGCTACACCTGGGATGAAAAATTGGCTGTGGATTGTAAAAATCTACAAAGACGAATAGCCCATTCTGTTTCAACTTCTTGCTGTACTGGTATCAACATGTTGAAGAATGAACTGCACAAGTGTTTGGCTGAGGACATTGTAGGTTAA 1644 0.3929 MDSDEECSIVLELSENDPFFDEKKKLLRCKGFGPKERIHLKCSSGPSLMNDTVKILLQIARIIQLNELELYFAEDDASVEFYSPRNELEALNSIVSLTDKSLSSCPHFHTNVLQGLQQKILDLISDFGDQNNMKGVLEKYHSCEREEHLIEWGKSHGVKTGLKIAYVEGAGRGMIAGKDLKVGDIAIEIPVSIIISEELVLETDMYRLLKEVDAISSETILLLWSMKEKYNCDSKFKIYFDTLPEKFNTGLSFGIEAITMLDGTLLFEEIMQSRQHLHAQYDELVPALCNGFPDIFPPEIYTWDNFLWACELWYSNSMKIMYSDGKLRTCLIPLAGFLNHSLCPHITHYGKVDPSTNSLKFCLSRPCRSGEECCLSYGNFSSSHFITFYGFLPQGDNLYDVIPLDIDSSDVDSIEDKPVSNWTTHMVCGTWLSNNHSIFYYGLPSPLLDHLRRSRSPVMQTKTFLQGNLENELEVLGDLKDIFDDMMDSMGEVDLDNRESYTWDEKLAVDCKNLQRRIAHSVSTSCCTGINMLKNELHKCLAEDIVG 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00347 547 Pfam SET domain 171 378 IPR001214 GO:0005515
Mepo1g00347 547 CDD SET_LSMT 161 392 - -
Mepo1g00347 547 FunFam Transcription factor, E2F and DP-related 144 392 - -
Mepo1g00347 547 Gene3D - 2 122 IPR036464 -
Mepo1g00347 547 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 129 488 - -
Mepo1g00347 547 SUPERFAMILY SET domain 146 399 IPR046341 -
Mepo1g00347 547 FunFam SET domain-containing protein 4 139 - -
Mepo1g00347 547 Gene3D set domain protein methyltransferase, domain 1 143 392 - -
Mepo1g00347 547 ProSiteProfiles SET domain profile. 160 378 IPR001214 GO:0005515
Mepo1g00347 547 Pfam Rubisco LSMT substrate-binding 15 108 IPR015353 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mepo1g00347 SET 1.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00347 K19199 - gmx:100778605 904.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00347 1 3289854 3299439 Mepo1g00347 1 3289854 3299439 ECH