Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00346 ATGAAAGAATATTGGACTTCTCTTGCATCAATTCTTGGTGTATTTGCATTCTTCCAAACAATCCTCCAAACAGTTTTCCCACCTGAACTCCGTTTCGCTTCCGCTAAACTTTTCAACAAATTCTTCAACTGTTTCTCATCTTACTGTTACTTCGAAATAACCGAAATCGACGGCGTTAACACCAACGAACTCTACAACGCTGTTCAGCTTTACCTAAGTTCCTCCGTTTCCATCACCGGAAACCGTTTAAGCTTAACACGCGCCGTTAACTCAAGCGCCTTCACGTTCAGTCTCGCCAACAATGACAGCATCATCGACACATTTAACGGCGTTAACGTTGTTTGGGAACATGTTGTCACCCAGAGAAACTCTCAAACATTTTCATGGCGTCCATTACCAGATGAAAAACGAGGTTTCACTCTTCGTATCAAGAAAAAAGATAAACACTTGTTGTTAAACTCTTATTTGGATTACATTATGGAAAAAGCTAGTGATATTCGAAGAAAGAATCAAGATCGTTTATTGTACACAAATTCAAGAGGTGGGTCGTTGGATTCAAGGGGTCATCCATGGGAATCTGTGCCGTTTAAGCATCCAAGTACTTTTGATACATTGGCTATGGATCCTGTGAAGAAGAAAGAGATTATGGAAGATTTGCAAGATTTTGCAAATGGACAAGGCTTTTATCATAAAACTGGTAGGGCTTGGAAAAGAGGTTATCTTCTTTATGGTCCTCCAGGAACTGGAAAATCTAGCATGATTGCTGCTATGGCTAATTTTCTTGGTTATGATATTTATGATTTGGAGTTAACCGAAGTTCATAATAATTCTGAACTTAGAAAACTTCTTATGAAAACAAGTTCTAAGTCTATTATTGTTATTGAGGATATTGATTGTTCTATCAACCTCTCTAACAGAAAAAACAATAAGAAAAGTGTTGGTTCTGTTTCTGTTAATTCTAGGAGTTTCTATGAGAATGGTGTTGGTGAAATGAGAGGTGGTGTTAGTGGTGAAGAGAATGGGAATTCAATAACGCTTTCTGGGTTGTTGAATTTCACTGATGGGTTATGGTCTTGTTGTGGAAGTGAAAGGATTTTTGTGTTTACTACGAATCATATTGAGAAGCTTGATCCTGCTTTGTTGAGGAGTGGGAGAATGGATATGCATATTTTCATGAGTTATTGTTCGATACAAGCTTTGAAGATTTTGTTGAAGAATTATTTGGGGTGTGAAGAGGGTGTTGATTTGGATGACTCTGTTTTGAAGGAATTGGAGGAAGTTGTTGAAATGGCGAGGATGACTCCAGCAGATATAAGTGAGGTTTTGATTAAGAATAGGAGGAAGAAAGAGAAAGCTGTGGATGAGTTGTTGGAGGTTTTGAAGGTGAGAGCAGAGAGGAATGCAAAAAATGGTGGTGTTGTGAGGAGGGAAATTAATGGGGTTGGAGATGAAGATGATGTTGAAGAGGAAGAGCAAGAGAAAAGGGCACTTGATAGTGACAGTCCTAAACAAGAATCTGAGATTGAAGATGATTGCAAGGAAGGATCAGAGGAGGAAGAGAAAATCAAGTGA 1572 0.3855 MKEYWTSLASILGVFAFFQTILQTVFPPELRFASAKLFNKFFNCFSSYCYFEITEIDGVNTNELYNAVQLYLSSSVSITGNRLSLTRAVNSSAFTFSLANNDSIIDTFNGVNVVWEHVVTQRNSQTFSWRPLPDEKRGFTLRIKKKDKHLLLNSYLDYIMEKASDIRRKNQDRLLYTNSRGGSLDSRGHPWESVPFKHPSTFDTLAMDPVKKKEIMEDLQDFANGQGFYHKTGRAWKRGYLLYGPPGTGKSSMIAAMANFLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDIDCSINLSNRKNNKKSVGSVSVNSRSFYENGVGEMRGGVSGEENGNSITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSIQALKILLKNYLGCEEGVDLDDSVLKELEEVVEMARMTPADISEVLIKNRRKKEKAVDELLEVLKVRAERNAKNGGVVRREINGVGDEDDVEEEEQEKRALDSDSPKQESEIEDDCKEGSEEEEKIK 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00346 523 CDD RecA-like_BCS1 215 392 - -
Mepo1g00346 523 MobiDBLite consensus disorder prediction 475 523 - -
Mepo1g00346 523 Pfam Domain associated at C-terminal with AAA 26 118 IPR025753 -
Mepo1g00346 523 Pfam ATPase family associated with various cellular activities (AAA) 241 393 IPR003959 GO:0005524|GO:0016887
Mepo1g00346 523 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 451 IPR027417 -
Mepo1g00346 523 Gene3D - 192 394 IPR027417 -
Mepo1g00346 523 SMART AAA_5 236 396 IPR003593 GO:0016887
Mepo1g00346 523 PANTHER BCS1 AAA-TYPE ATPASE 7 467 - -
Mepo1g00346 523 MobiDBLite consensus disorder prediction 494 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00346 Mepo-Chr1 3281698 3283867 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00346 212 434 Calmodulin-binding Proteins AT3G56690 24.706 1.33e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00346 - - gmx:100813109 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00346 1 3281698 3283867 Mepo1g00346 1 3281698 3283867 ECH