Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00328 ATGATGATGGATAGTCCCACAGCCATTAGATCACCGGCCACCACCGGTTCGGGTTCCGGTTCGAACGATGATGGCCGGCGTGTTAAATTTTTGTGTAGCTTTCTAGGTAGCATAATGCCACGTCCACAAGATGGGAAGTTACGTTACGTAGGTGGTGAGACACGAATTGTGAGTGTTTCGAGGGATATCAGTTTTGAGGAGTTGATGGGGAAAATGAGGGAGTTGTATGAAGGTGTGGCTGTGTTGAAGTATCAACAACCTGATGAAGATCTTGATGCACTTGTTTCTGTTGTTAATGATGATGATGTGGTTAATATGATGGAAGAGTACGATAAGTTGGGTTCTGGAGATGGGTTCACTAGGCTTAGGATTTTCTTGTTTTCGCAATCCGAGCAAGATGGTTCGGCACATTTTATTGATGGGGATGATCCCGAGAGGAGGTATGTGGATGCATTGAATAGTTTGAATGATGCTTCTGAGTTAAGGAGGTTGCAACAAATGGAGTTTCCGTTGATTGGTACTGTTGAGGATATCCATGTGGGTGATCAGTATATTAGTCCGGTTGGTATGGAAAATGGGATTCTTAGTCAGAGAAGTGGGGAGCTAGCTATGTCACAATATGGTTTGCATCATATGCCTATTCAGCATCAGCAACCTATGGGACAGAGGTATAATGAAATCGATGCTCCGTGGAATTCTGGTTATTACTCTCCTAGGCATCATGGTCAGTGTCACCATGATTCTAGAACATCATTGGTTGAGTATCCGTCTTCACCTTCTGGTGCAAGGTACCGAATGCCCTTTCCTGAGATGCCAGATAAGGGAATTGATAGAGTGTCGGATGAGTATGCTCGACATCACGTAAACCACCATCCTGTGTATGATAATCAACCGCAGTATCCGGAAAATGTTGTTTGGTTGCCGACTGGACCAGCACATGGTGGTGATAAGTCTGGTTTTCCAGGCAACGTTCTTCATGGTTCCCATGCTCTTGATGGGAATAATATTTGCGAGCACTGTCGTATGAGTTTTCAGAGGCCTCAACCACATTTGGAGCATCCTAATATGCTTCCATCTGTTGCCATTCCATGTCCAGAATGTCCTTCAAGCAGGGATGCTCTCATAGTGAATGCTGATGCCAAGTTACAACCTCCTATGTATCCCAATGATACTCGGAATCATGAGAGAGGATGTGGTTTGCAGCATCAGAATTCTGCAAGAGTGGGTGATCATTATGTTGGCGATGTTCCTATCATTAGTTTCTCTCCCAGACATGGTAGTATGATTGATGGACATGCTCTTCCTTCCAATCATGTTCATCAACCGGTTGGACCTGAATTGGGGGTTGAACTGTTCCCTGACCAAACCATGGCTGCTATACCACATCTAAAAATTCCTCCACTGGAAGAATCCAGTGTGCAGTATGGAAATCCACCTTCTCCTTATGGAGTAGATAATAACTATGCCATGCCTCGTGGACAAGCACCTGGTTATACTCTCTGGAGAAACGGGCCGACTCCGGTTCATATTGGACCACCGCATGAGGCAATTACGCTACCTCAGCCGGTTGATGGTGTGATAAATGCTGGAATAATCAGGGGAGAGGGCAGTCCAGGATTTTTCGTTGGACCAGATAGTCAAAGTCTTTGGGTTGATTCGTCACAGAAATTTTCAGGTCATGATGGGTCAGCCACCCCAGAATACCCTCACGCAAATGCTCCAAAGTTGAATCCAATGGCTATTGATCAGGAAAACCCACACCCGATTATTGTAGATGCCATCCATCCTCCACAGGATGTAAACGCTAGTACCTACTTGGAACCTGTGCAGCTGCAAAAATCTTCATTTCATATGGTTCACAATAACGGGGTTTTAAAAAATGATGCTCATTTGACTGAAGGGATTAGTTTGCAATCTATAGGGTTGCTTGGAGAAAGACAAGAAGCAAAAAAAGAGGATACAGTTGAAAAATCTAATGTGCAAAGTATATCTTTTCCAGAACAAAGTCAAATTGTTGAAAATGTATCCAGCACCGCTGCTTCTGTGGTTGAATGGGATAATTCATTTTCGAAACCTGCATCAGGGTGTGAACATGGCGAGAAAGTGGCTGATAAGGATTGTTCTGCTCCTGAAGATTCTAAAGGTTTAGTTGATCAATTTAATATCTTGCCTGAGTTGATTGCTTCTGTTAAAAAGGCTGCGTTAGAATGCCACGACGAGGTGAAACCTACAGGTAAAGAGAATGCCAATTGTCAGATGGACAATTCGAATACCAAAGAAGAAAAGGCAAATGAAGTTGAACCAGTGAATGTTCATGGTGATTTAGAATTGGACTCTGAAAATGACCGTGTTGATACTTCTAAAATCGAGCCTACGAAGGCTGAGGCAGAAGCAATTGCCAGGGGATTGCAGACGATTAAAAATGATGATTTGGAGGAGATCCGTGAGCTAGGTTCTGGAACTTATGGAGCTGTTTATCATGGGAAGTGGAAAGGTTCTGATGTCGCCATTAAGAGAATAAAAGCTAGCTGTTTTGCTGGAAGACCATCCGAAAGAGCAAGATTGATTGCCGATTTCTGGAAGGAGGCATTGATGCTTAGTTCATTGCATCATCCAAATGTTGTCTCTTTCTATGGTATTGTTCGTGATGGCCCTGATGGCTCTTTAGCAACAGTGACAGAATTCATGGTTAATGGGTCTTTGAAACAGTTCTTGCATAAGAAGGACAGAACGATAGATCGACGGAAGAGGCTCATTATAGCCATGGATTCTGCATTTGGGATGGAGTATTTGCATGGAAAGAACATTGTTCATTTTGATTTGAAATGCGAGAATCTATTGGTAAATATGAGAGATCCACAAAGGCCTGTCTGCAAGATTGGTGATTTGGGTCTATCAAAGGTTAAACAACACACTCTAGTGTCAGGAGGGGTACGCGGAACTTTGCCGTGGATGGCACCTGAACTTCTTAGCGGGAAAAGCAATATGGTGTCAGAAAAGATTGATGTTTACTCGTTCGGGATAGTCATGTGGGAATTACTCACCGGCGATGAACCTTATGCTGATATGCATTGTGCTTCAATAATAGGAGGAATTGTGAACAACACTTTACGTCCACAAATCCCGACATGGTGTGATCCTGAGTGGAAATCTCTCATGGAAAGTTCTTGGGCCTCTGATCCTGTAGAAAGGCCATCATTTTCAGAAATTTCCAAGAAGCTGAGGAGTATGGCTGCTTCAGTGAATGTGAAATAG 3255 0.4344 MMMDSPTAIRSPATTGSGSGSNDDGRRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVSRDISFEELMGKMRELYEGVAVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSGDGFTRLRIFLFSQSEQDGSAHFIDGDDPERRYVDALNSLNDASELRRLQQMEFPLIGTVEDIHVGDQYISPVGMENGILSQRSGELAMSQYGLHHMPIQHQQPMGQRYNEIDAPWNSGYYSPRHHGQCHHDSRTSLVEYPSSPSGARYRMPFPEMPDKGIDRVSDEYARHHVNHHPVYDNQPQYPENVVWLPTGPAHGGDKSGFPGNVLHGSHALDGNNICEHCRMSFQRPQPHLEHPNMLPSVAIPCPECPSSRDALIVNADAKLQPPMYPNDTRNHERGCGLQHQNSARVGDHYVGDVPIISFSPRHGSMIDGHALPSNHVHQPVGPELGVELFPDQTMAAIPHLKIPPLEESSVQYGNPPSPYGVDNNYAMPRGQAPGYTLWRNGPTPVHIGPPHEAITLPQPVDGVINAGIIRGEGSPGFFVGPDSQSLWVDSSQKFSGHDGSATPEYPHANAPKLNPMAIDQENPHPIIVDAIHPPQDVNASTYLEPVQLQKSSFHMVHNNGVLKNDAHLTEGISLQSIGLLGERQEAKKEDTVEKSNVQSISFPEQSQIVENVSSTAASVVEWDNSFSKPASGCEHGEKVADKDCSAPEDSKGLVDQFNILPELIASVKKAALECHDEVKPTGKENANCQMDNSNTKEEKANEVEPVNVHGDLELDSENDRVDTSKIEPTKAEAEAIARGLQTIKNDDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERARLIADFWKEALMLSSLHHPNVVSFYGIVRDGPDGSLATVTEFMVNGSLKQFLHKKDRTIDRRKRLIIAMDSAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVKQHTLVSGGVRGTLPWMAPELLSGKSNMVSEKIDVYSFGIVMWELLTGDEPYADMHCASIIGGIVNNTLRPQIPTWCDPEWKSLMESSWASDPVERPSFSEISKKLRSMAASVNVK 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00328 1084 PRINTS Tyrosine kinase catalytic domain signature 1001 1023 IPR001245 GO:0004672|GO:0006468
Mepo1g00328 1084 PRINTS Tyrosine kinase catalytic domain signature 893 906 IPR001245 GO:0004672|GO:0006468
Mepo1g00328 1084 PRINTS Tyrosine kinase catalytic domain signature 1045 1067 IPR001245 GO:0004672|GO:0006468
Mepo1g00328 1084 PRINTS Tyrosine kinase catalytic domain signature 930 948 IPR001245 GO:0004672|GO:0006468
Mepo1g00328 1084 Pfam PB1 domain 43 128 IPR000270 GO:0005515
Mepo1g00328 1084 SUPERFAMILY Protein kinase-like (PK-like) 803 1072 IPR011009 -
Mepo1g00328 1084 Pfam Protein tyrosine and serine/threonine kinase 812 1074 IPR001245 GO:0004672|GO:0006468
Mepo1g00328 1084 ProSitePatterns Serine/Threonine protein kinases active-site signature. 936 948 IPR008271 GO:0004672|GO:0006468
Mepo1g00328 1084 MobiDBLite consensus disorder prediction 8 22 - -
Mepo1g00328 1084 ProSiteProfiles Protein kinase domain profile. 811 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00328 1084 Gene3D Phosphorylase Kinase; domain 1 796 897 - -
Mepo1g00328 1084 ProSitePatterns Protein kinases ATP-binding region signature. 817 838 IPR017441 GO:0005524
Mepo1g00328 1084 SUPERFAMILY CAD & PB1 domains 44 133 - -
Mepo1g00328 1084 CDD PB1_UP2 31 127 - -
Mepo1g00328 1084 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 804 898 - -
Mepo1g00328 1084 MobiDBLite consensus disorder prediction 746 766 - -
Mepo1g00328 1084 Gene3D - 46 130 - -
Mepo1g00328 1084 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 47 129 - -
Mepo1g00328 1084 MobiDBLite consensus disorder prediction 1 24 - -
Mepo1g00328 1084 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 899 1084 - -
Mepo1g00328 1084 SMART serkin_6 811 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00328 1084 SMART PB1_new 42 127 IPR000270 GO:0005515
Mepo1g00328 1084 Gene3D Transferase(Phosphotransferase) domain 1 898 1083 - -
Mepo1g00328 1084 CDD STKc_MAP3K-like 817 1074 - -
Mepo1g00328 1084 PANTHER SERINE-THREONINE PROTEIN KINASE 85 1077 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00328 Mepo-Chr1 3133305 3138689 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00328 22 1084 MAP Kinase Kinase Kinase AT5G57610 52.381 0.0 1018
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Mepo1g00328 PK_Tyr_Ser-Thr 6e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00328 - - tpra:123909448 1886.31