Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00319 ATGGTGTCTCCCAAAAACATAGGAAAATATAGACTTGGCAGGACCATAGGAGAAGGTACATTCTCTAAGGTTAAGATTGCTTTAAATAGCAACAATGGTGAGAAGGTAGCAATCAAGGTCATTGACAAACAAATGGTCTTGAAAAACAATCTAAAACATCAGGTTATTGGCACAAAAACAAAAATATACATTGTGATGGAATATGTATCAGGAGGTCAACTATTGGACAAAATATCCTATTCCAACAAACTGAATGAATGTGAGACAAGAAAACTATTCCATCAACTTATTGATGCCGTCGACTACTGCCATAACAAGGGAGTTTATCATCGCGATCTCAAGCCAGAAAACTTGCTCATAGACAGCAAGGGAAATCTAAAAGTGTCTGATTTTGGATTAAGTGCACTGAATAAGCTGCTGATGAGCAAAGGGTATGATGGAGCAGCTGCTGATGTTTGGTCATGTGGGGTGATTCTTTTTGAGTTACTTGCTGGTTTTCTACCATTCGATGACCAGAACTTGATGAATTTATACCATAAGATATGCAGAGTGGAATACGTATGTGCCCCATGGTTTACTCAAAGCCAAAAGAAACTAATTGCGAAAATACTTGAACCGCATCCTGGAAAGCGGATAACTATTTCGGGTATTATTGATGATGAGTGGTTTCAAACAGATTATAAGCCTATTTGTGCATATGAATTTGATCCGATCATTAACTTGGATGATGATAGTTGTGCTTTCGGTTCAATCGAGGAGAAAAGTACAAAGCCAACGATAACCAAGTCCTCGAGCTTCATTAACGCGTTTCAACTGATAGCCATGTTTCAGGACTTTGATTTATCCACCCTTTTTGAAGAACAGGATCACATGAAGCAGACAACAAGGTTTGGATCCCAACATACAATCACTGAAACCATCGAAAAAATAGAAGCTGCTGCAGCAGATGTTAGACTGTCAGTAGAAAAAATGAACAACTTTAAGATGAAAATGCACTCGAAAGAGACAATGACGAGGTGTTCTAGATCATGCTTTGACATATCAGCTGAGGTGATAGAAGTTGCTCCGGCTCATTGTGTTGTACAAGTATCAAAATCTGTAGGAGATCTAAGAATGTATAATGAATTTTGTGAAAGTTTATCAAATCTGCTGAAAGACGAATCTAGTATTCCACCACAAGGCCAAGACTCTGTGGATCGATGCGACACTGGCAGCATAGAAAAGCAAGATGCTGAATCGTAG 1242 0.3865 MVSPKNIGKYRLGRTIGEGTFSKVKIALNSNNGEKVAIKVIDKQMVLKNNLKHQVIGTKTKIYIVMEYVSGGQLLDKISYSNKLNECETRKLFHQLIDAVDYCHNKGVYHRDLKPENLLIDSKGNLKVSDFGLSALNKLLMSKGYDGAAADVWSCGVILFELLAGFLPFDDQNLMNLYHKICRVEYVCAPWFTQSQKKLIAKILEPHPGKRITISGIIDDEWFQTDYKPICAYEFDPIINLDDDSCAFGSIEEKSTKPTITKSSSFINAFQLIAMFQDFDLSTLFEEQDHMKQTTRFGSQHTITETIEKIEAAAADVRLSVEKMNNFKMKMHSKETMTRCSRSCFDISAEVIEVAPAHCVVQVSKSVGDLRMYNEFCESLSNLLKDESSIPPQGQDSVDRCDTGSIEKQDAES 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00319 413 SMART serkin_6 10 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00319 413 ProSiteProfiles Protein kinase domain profile. 10 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00319 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 108 120 IPR008271 GO:0004672|GO:0006468
Mepo1g00319 413 Gene3D Transferase(Phosphotransferase) domain 1 141 230 - -
Mepo1g00319 413 CDD CIPK_C 268 386 - -
Mepo1g00319 413 ProSitePatterns Protein kinases ATP-binding region signature. 16 48 IPR017441 GO:0005524
Mepo1g00319 413 Gene3D Phosphorylase Kinase; domain 1 2 54 - -
Mepo1g00319 413 Pfam NAF domain 265 323 IPR004041 GO:0007165
Mepo1g00319 413 MobiDBLite consensus disorder prediction 386 400 - -
Mepo1g00319 413 MobiDBLite consensus disorder prediction 386 413 - -
Mepo1g00319 413 Pfam Protein kinase domain 10 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00319 413 Pfam Protein kinase domain 139 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00319 413 Gene3D Kinase associated domain 1, KA1 262 387 - -
Mepo1g00319 413 ProSiteProfiles NAF domain profile. 262 286 IPR018451 GO:0007165
Mepo1g00319 413 FunFam Non-specific serine/threonine protein kinase 262 388 - -
Mepo1g00319 413 Gene3D Phosphorylase Kinase; domain 1 55 71 - -
Mepo1g00319 413 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 375 - -
Mepo1g00319 413 SUPERFAMILY Protein kinase-like (PK-like) 7 237 IPR011009 -
Mepo1g00319 413 Gene3D Transferase(Phosphotransferase) domain 1 72 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00319 Mepo-Chr1 3071439 3074196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00319 66 389 CBL-interacting serine-threonine protein kinases AT5G57630 55.072 2.32e-119 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Mepo1g00319 Pkinase 2.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00319 - - mtr:11440772 762.296