Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00315 ATGGGTATTGAAAGAGGGGGAGGACTAAAGAGTTTTCGAAGCGGCTGGAGTGTGCCACCTAAGCTATGTGATTCTTGCAAGCTTACTCCCGCCGCGCTTTTTTGCCGTTCTGATTCTGCGTTTCTATGCATCAACTGTGATTCCACCATTCACTCTGCTAACAAACTCTCTTCCCGCCACGAACGCGTTTGGATGTGTGAAGTTTGTGAACAAGCACCAGCTTCCGTCACCTGCAAAGCTGACGCCGCTGCTCTCTGCGTCACGTGCGATTCCGACATCCACTCCGCCAATCCACTCGCTCGCCGTCATGAACGTGTTCCCGTCGAACCTTTCTTTGACTCTGCTGTATCCGTCGTCAAATCCTCCACCGCCGCCGCCGCAGCAGCCGCGTCTTTCAATTTCGTTGTTCCTACAGACGACGGTTACGGTCAAGATGATGCTGAAGCAGCTGCGTGGCTTATTCCGAATCCTAATTTTGGATCCAAACTCAATGAAACTCAAGATATCAAAACTAGAGAGATGTTCTTCTCTGATATGGATCCGTTTCTAGATTTTGATTACTCAAACAATTTCCAGAACAATAACTGCAGCAACGCGATGAATGATAGCGTTGTTCCTGTTCAAACTAAACCAACTCCGGCGCCGATGATGAATCATAACTCAGAAGGTTGCTTTGACATCGATTTTTGCAGATCGAAGCTATCTTCATTTAACTATCCCTCACATTCTATTAGCCATAGCCAGGTTTCGTCATCTTCACTTGACGTAGGAGTGGTGCCAGACGGAAACACCGTGTCAGAGATATCATACAATTTTGGATCGGAATCGATGGTTTCAGGGGGTGTGAATAGTAACCAAGGGGTGCAAGGAGCAACACAATTATGTGGAATGGATCGTGAAGCGAGGGTTATGAGGTACAGAGAGAAGAGGAAGAACCGAAAATTCGAGAAGACCATTCGTTACGCTTCACGAAAAGCTTATGCAGAAACCCGGCCTAGAATTAAAGGCCGGTTCGCTAAAAGAACCGAAATTGACTCGGATGTGGACCGTCTCTATAACACTGCTGATCCTCTCGCAGCTCCTTCATCTATGCTAATGGACTGTCCATACGGCGTCGTTCCCACGTTTTAG 1131 0.4748 MGIERGGGLKSFRSGWSVPPKLCDSCKLTPAALFCRSDSAFLCINCDSTIHSANKLSSRHERVWMCEVCEQAPASVTCKADAAALCVTCDSDIHSANPLARRHERVPVEPFFDSAVSVVKSSTAAAAAAASFNFVVPTDDGYGQDDAEAAAWLIPNPNFGSKLNETQDIKTREMFFSDMDPFLDFDYSNNFQNNNCSNAMNDSVVPVQTKPTPAPMMNHNSEGCFDIDFCRSKLSSFNYPSHSISHSQVSSSSLDVGVVPDGNTVSEISYNFGSESMVSGGVNSNQGVQGATQLCGMDREARVMRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEIDSDVDRLYNTADPLAAPSSMLMDCPYGVVPTF 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00315 376 ProSiteProfiles Zinc finger B-box type profile. 18 65 IPR000315 GO:0008270
Mepo1g00315 376 Pfam CCT motif 299 341 IPR010402 GO:0005515
Mepo1g00315 376 ProSiteProfiles Zinc finger B-box type profile. 61 108 IPR000315 GO:0008270
Mepo1g00315 376 CDD Bbox1_BBX-like 66 108 - -
Mepo1g00315 376 SMART bboxneu5 66 108 IPR000315 GO:0008270
Mepo1g00315 376 SMART bboxneu5 18 65 IPR000315 GO:0008270
Mepo1g00315 376 CDD Bbox1_BBX-like 22 65 - -
Mepo1g00315 376 Pfam B-box zinc finger 20 62 IPR000315 GO:0008270
Mepo1g00315 376 Pfam B-box zinc finger 63 108 IPR000315 GO:0008270
Mepo1g00315 376 ProSiteProfiles CCT domain profile. 299 341 IPR010402 GO:0005515
Mepo1g00315 376 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 23 359 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00315 Mepo-Chr1 3035435 3037383 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00315 6 376 C2C2-CO-like Transcription Factor Family AT5G57660 52.880 6.32e-117 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Mepo1g00315 zf-B_box 4.7e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00315 - - cam:101510742 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00315 1 3035435 3037383 Mepo1g00315 1 3035435 3037383 ECH