Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00313 ATGGGATCTTCCTTGAGTTGTTGTGGCTCAGAGAAGGTTGATGAAGTGCCAACATCATATGGTGTAGCTAACAATTCTTGGAGAATTTTCACATACAAGGAGTTGCATACAGCTACAAACGGGTTCAGTGATGATTATAAGCTTGGTGAAGGTGGGTTTGGGAGTGTCTATTGGGGAAGAACCATTGATGGTCTCCAGATAGCAGTGAAGAAACTGAAAGCAATGAATTCAAAAGCAGAGATGGAATTTGCTGTAGAAGTTGAAGTGCTTGGAAGGGTTAGGCACAAAAATTTGTTGGGTCTAAGGGGATATTGTGTTGGTGATGATCAAAGGCTTATTGTCTATGATTACATGCCAAATCTAAGTCTGCTTTCTCATCTCCATGGTCAATATGCTGGTGAAGTTCAACTCAACTGGCAAAAGAGAATGAGCATTGCAATTGGCTCTGCTGAAGGCATTTTGTACTTGCACCATGAGGTCACACCCCACATCATCCATAGGGACATCAAAGCTAGTAATGTTTTGCTTGATTCAGATTTTGTTCCCTTAGTTGCTGATTTTGGTTTTGCAAAGCTAATACCAGAAGGAGTTAGCCACATGACAACCAGGGTTAAGGGTACCTTAGGATACTTAGCACCTGAGTATGCTATGTGGGGAAAAGTTTCTGAAAGCTGTGATGTCTATAGTTTTGGAATTCTTCTGTTAGAGCTTGTAACTGGTAGAAAGCCCATAGAAAAACTACCTGGTGGGCTTAAGAGAACAATAACTGAATGGGCTGAGCCTTTGATAACCAAAGGAAGATTTAGGGATATGGTTGATCCAAAACTCAGAGGAAACTTTGATGAAAATCAAGTTAAACAAACAGTTAATGTGGCTGCTCTTTGTGTGCAAAGTGAACCTGAGAAACGACCAAACATGAAGCAAGTTGTTAGTCTTTTGAAAGGACAAGAACCTGATCAAGGGAAAGTGACTAAGATGAGAATTGATAGTGTCAAATATAATGATGAATTATTGGCACTTGATCAACCTAGTGATGATGATTATGATGGAAACAGTAGCTATGGTGTTTTTAGTGCTATTGATGTCCAAAAGATGAAAGATCCTTACAAGAAAATTGGCTAA 1122 0.3957 MGSSLSCCGSEKVDEVPTSYGVANNSWRIFTYKELHTATNGFSDDYKLGEGGFGSVYWGRTIDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCVGDDQRLIVYDYMPNLSLLSHLHGQYAGEVQLNWQKRMSIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFVPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELVTGRKPIEKLPGGLKRTITEWAEPLITKGRFRDMVDPKLRGNFDENQVKQTVNVAALCVQSEPEKRPNMKQVVSLLKGQEPDQGKVTKMRIDSVKYNDELLALDQPSDDDYDGNSSYGVFSAIDVQKMKDPYKKIG 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00313 373 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
Mepo1g00313 373 Gene3D Phosphorylase Kinase; domain 1 14 117 - -
Mepo1g00313 373 CDD STKc_IRAK 48 315 - -
Mepo1g00313 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Mepo1g00313 373 Gene3D Transferase(Phosphotransferase) domain 1 118 331 - -
Mepo1g00313 373 ProSiteProfiles Protein kinase domain profile. 42 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00313 373 Pfam Protein tyrosine and serine/threonine kinase 47 313 IPR001245 GO:0004672|GO:0006468
Mepo1g00313 373 SMART serkin_6 42 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00313 373 SUPERFAMILY Protein kinase-like (PK-like) 23 313 IPR011009 -
Mepo1g00313 373 PANTHER OS01G0253100 PROTEIN 25 319 - -
Mepo1g00313 373 FunFam PTI1-like tyrosine-protein kinase At3g15890 14 117 - -
Mepo1g00313 373 FunFam PTI1-like tyrosine-protein kinase At3g15890 118 331 - -
Mepo1g00313 373 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00313 Mepo-Chr1 3009516 3011294 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00313 1 364 Trihelix Transcription Factor Family AT1G70460 42.857 8.64e-95 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Mepo1g00313 PK_Tyr_Ser-Thr 9.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00313 - - gsj:114393039 670.618