Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00311 ATGGCCAAGTCCTTGTGGTTTTCTTGGTTTCTAACATTTTTCCTTCTGGTGGTACAGATGCAAACTGTGAGTACTGATGATCAGTCAAACGCAACATCGATTGGAGTGATCAATTTGAGGGTCGGGGTCCCTAAAAAAGAAGGTTTCGCCCAATTTGTGAAAGTAGTCTGGAACTCTCATGAAAACAACTACAATGTCTCTGGATATTGCATGGATATTTTCAATGCCGTTGTAAACCATTTACCTTTTAAAGTTTCTCTACAAATCAAACCTTATGTTAATGAATCAAAAGTCAGTGCTGGATCATATGACTCACTTATCCAACAGGTCTCAAAAAAGTATGATGTTGTGGTTGGGGACATAACAATCGTGGCGAATCGTACACAGTTTGTAGATTTCACACTTCCATATACAGTATCAGGAGTTAGAATGTTAGTTTCAGTTCAACATGGGAGGCACCAAACCATGTGGATTTTTGTGAAACCCTTCAGTTGGCAACTTTGGTTGAGCATACTCATAATATCCATGCTCATAGGGTCTGTCATACTCATCATGGAAAGGAATGTACATACCCTTCCTAATGATCATCAGGAGGAGCGTTCGCCATTTAAAAAACAGCTCAGTGCAATAACCATCTTATGGTTTCCGATATCACAAGCCGTCCTACCCGAAAGACAAGTGGTTGCCAAGAACTGCTCAAGATTTGTGTTAATGGTTTGGCTTCTGTTGGCGTTCGTCCTAATGCAAAGTTACACAGCAAACTTGACGTCAATATTGACCTTAGATAAGATGCAACCTAGTTTTCTCAGCGTAAATGATCTAAGGAAAGGGGATCATTATGTTGGATATCAAGCAGGTTCTTTCGTTTGTGATCTGTTGGTACATCAATTGAAGTTTAATCCATTGAAATTGAAGGCATATGGCAATGTTTCGAGCTATCACCGTGCTTTAAAGCTTGGAAGCCAACGTGGGGGTGTCACAGCTATATTTGATGAAGTGCCCTACCTTAATGTCTACCTTCAAAAGTTTAGATCAAATTATATCATATCCGGCCCCACCTATCGAACAGATGGATTTGGTTTTGCATTCCCTTTGAACTCCAATCTTACTGCTCACTTTTCAAGAGCAATATTGAACGTGACACAAAATCATGAATTTATGGAGAAGATTGAGAAAAAATATTTTGGGAAGAGTATTGAAGGGTTACAACAGCTGTCTTCGCAAATATCTTCACCTTCACCAAGTCTTACCTTTCACAGCTTTGCAGGGCTCTTCTTAATCACCGGCATTTCTACCTTATTGGCATTATTTGTCTCTGAAACACTTATTTTTTGGCAAAAAACCATTTCAAAGGTTAAAGAATGCATTCATAGATACTTAACACGCTCATCAGTTTCCACAGAAACGCGTGTTCATCATGATCTTGATTCAACCCAAGGAACTGATCAGCCAAGCCTCCCTTCGGACGTGGTATGA 1476 0.397 MAKSLWFSWFLTFFLLVVQMQTVSTDDQSNATSIGVINLRVGVPKKEGFAQFVKVVWNSHENNYNVSGYCMDIFNAVVNHLPFKVSLQIKPYVNESKVSAGSYDSLIQQVSKKYDVVVGDITIVANRTQFVDFTLPYTVSGVRMLVSVQHGRHQTMWIFVKPFSWQLWLSILIISMLIGSVILIMERNVHTLPNDHQEERSPFKKQLSAITILWFPISQAVLPERQVVAKNCSRFVLMVWLLLAFVLMQSYTANLTSILTLDKMQPSFLSVNDLRKGDHYVGYQAGSFVCDLLVHQLKFNPLKLKAYGNVSSYHRALKLGSQRGGVTAIFDEVPYLNVYLQKFRSNYIISGPTYRTDGFGFAFPLNSNLTAHFSRAILNVTQNHEFMEKIEKKYFGKSIEGLQQLSSQISSPSPSLTFHSFAGLFLITGISTLLALFVSETLIFWQKTISKVKECIHRYLTRSSVSTETRVHHDLDSTQGTDQPSLPSDVV 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00311 491 Gene3D - 156 296 - -
Mepo1g00311 491 FunFam Glutamate receptor 2.7 35 155 - -
Mepo1g00311 491 CDD GluR_Plant 39 395 - -
Mepo1g00311 491 Pfam Ligand-gated ion channel 398 430 IPR001320 GO:0015276|GO:0016020
Mepo1g00311 491 Gene3D - 360 395 - -
Mepo1g00311 491 SMART GluR_14 38 397 IPR001320 GO:0015276|GO:0016020
Mepo1g00311 491 PRINTS NMDA receptor signature 421 445 IPR001508 GO:0005216|GO:0006811|GO:0016020|GO:0038023
Mepo1g00311 491 PRINTS NMDA receptor signature 235 262 IPR001508 GO:0005216|GO:0006811|GO:0016020|GO:0038023
Mepo1g00311 491 SUPERFAMILY Periplasmic binding protein-like II 39 398 - -
Mepo1g00311 491 Gene3D - 309 359 - -
Mepo1g00311 491 MobiDBLite consensus disorder prediction 471 491 - -
Mepo1g00311 491 Pfam Bacterial extracellular solute-binding proteins, family 3 60 397 IPR001638 -
Mepo1g00311 491 Gene3D - 33 155 - -
Mepo1g00311 491 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 38 447 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00311 Mepo-Chr1 2969461 2971791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00311 39 438 Ion Channels AT2G29110 42.647 2.98e-81 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00311 K05387 - tpra:123903997 753.821