Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00309 ATGATATTGCAAATCTTGAATCCGAAAAAGTGGATAACAAACATGAGATTCCAACTAAAAAGGAGGTTGATGAAGTTTGCGGTACCAGTTACTTCATCTTTCTTTAATTGGATTAGTAGTTGGTGGACATTTTGGAAAAAAAATGTTATTTCGGGAATGCATGAGTTCTGTGAGGATTTATCTGAAGTTCCGCAGCCTCCTTGGGTTAACATTAAATTTAGGGTTTCAGTATGGTGGGACTTTGACAGCTGTGGCGTCCCTTCCGATGTTAGCTTTTTAAATGTAACCCCTTCAATTATGGGAGTTCTTAGAGCTAACGGTATTAAGGGTCCTATTCATATTGACGCTTATGGTGATGTTTCTCAACTTTCAGAGATGGAACAAGAAGCACTTTTCTTATCCGGCATTGATCTCCACCACATTTCAGGTTCCTTTTGGGATGATGTGGAATCTTTTGTTTTCACGTCTAGAGGATCACGTCTTCTTTCCCGGTCAAGAAGCAGGGAGGATCTGGCTCGTAGATTACAAAAGCATGGACCCCTATTTTTTATGTCTTTCATTGAAAATGAAATCCTTCAATTGGTTGAACTGTTGATAGCAGAGAAGAAATGGTTGGAGGAAAGCCCCACACAAGCATTTCCTTTTCGGGTAACTAAATCAGTTCAGAAGCCTTGA 675 0.397 MILQILNPKKWITNMRFQLKRRLMKFAVPVTSSFFNWISSWWTFWKKNVISGMHEFCEDLSEVPQPPWVNIKFRVSVWWDFDSCGVPSDVSFLNVTPSIMGVLRANGIKGPIHIDAYGDVSQLSEMEQEALFLSGIDLHHISGSFWDDVESFVFTSRGSRLLSRSRSREDLARRLQKHGPLFFMSFIENEILQLVELLIAEKKWLEESPTQAFPFRVTKSVQKP 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00309 224 Pfam OST-HTH Associated domain 166 219 IPR025677 -
Mepo1g00309 224 CDD PIN_limkain_b1_N_like 74 142 - -
Mepo1g00309 224 PANTHER LIMKAIN B LKAP 74 154 IPR024768 GO:0005777|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00309 Mepo-Chr1 2940261 2941635 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00309 71 147 C2H2 Transcription Factor Family AT5G61190 35.802 1.16e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00309 - - mtr:25493560 167.933