Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00302 ATGTACAAGGTGTGGTGGTTAACTTGTCCATCTATCTATCAATCAGTCAATCAAGAGACCAATCATCGAACCGAATATAAAATGTCGTCCTCTTCAACCACAACATTAACCTTGGACCACCTCCCTCCTTCCGAGCAACTTTGTTATGTCCACTGCACCATCTGTGACACCATCCTTGCTGTGAGTGTTCCTTGCACAAGCTTGTTCAAGACCGTGACTGTGAGATGTGGTCATTGCACTAATCTGCTTCCAGAGGAGATGCCAAACCCAGCTCCAAATTTTATGATGAACCACATAAATGCACCAAATGATTTCTCTATGCCTCCCACTAGGACAGTAGCTGAAGAGCTTCCACGCCCACCAATCATAAACAGACGTGAGATTCATTATCTAATCTTATTCTTTTACTTGAAAGCAAGGGACGAGATCAACCACATTAATTATGTCAATCCTGATTTAACCCACAGGGAAGCCTTTAGCGCAGCTGCCAATAATGTATGA 501 0.4311 MYKVWWLTCPSIYQSVNQETNHRTEYKMSSSSTTTLTLDHLPPSEQLCYVHCTICDTILAVSVPCTSLFKTVTVRCGHCTNLLPEEMPNPAPNFMMNHINAPNDFSMPPTRTVAEELPRPPIINRREIHYLILFFYLKARDEINHINYVNPDLTHREAFSAAANNV 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00302 166 Pfam YABBY protein 43 89 IPR006780 GO:0007275
Mepo1g00302 166 PANTHER PROTEIN YABBY 6-RELATED 28 165 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00302 Mepo-Chr1 2845923 2850360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00302 44 165 C2C2-YABBY Transcription Factor Family AT2G26580 41.727 2.42e-24 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Mepo1g00302 YABBY 1.2e-22 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00302 K25796 - gmx:100798441 174.481