Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00281 ATGGAGTTCAAATTTCGTGCTATCGACAACATCAATCCATCAACCATGCAGTGTTCTCTTTCCACCGTCACATGTCTCCCTGATCGATCTCTTCCAATGGACGGTGGTTTTTCTGGCTTCCGAGCACCGTTGGCCACCAACGAGGCAGCATTATGGAGAGAGATCGAGAAAGAACAAATCCGGAGGGATATGTTGCGGCGGATGGAGTTGGAAGAGGAAGTGAGAAGGGAGCTTGCAATGGAGGGGGCGTTTGGAATTGGAACTATGCAGAGGCCGGTCAATTCTCTGTGGTCAGATTCTACACCGATGATGAAGAACCCTGTTGCTGTTGCTGTTGCTCTTGATGATCGCATGGGTGCTTCAAAATCACAGATCAGTGACAAGGACAAACTTATTCTGTTGGCTAAGCCAGATCTCGATCTCTATAGTGCAAAGCGAAAAGCAGTGACACATGATGTTCTTGACGACGAGCCTTCTGCAATTGGTTTGAACAAAAAGCTGAAGGAGGAGGAGTGGAGTTGTGAACTGTGTCAGATTAAAGCCTCAAGTGAGAATGGCTTGAATGATCATCTGAATGGTAAGAAGCATAAGTCTAGAGAAGCAAGACAGAAAAGGAAGATTGACGAGCACGACAAGAAAAGTGAAAAAACTGCGAAAAATGCTACTGATGCAGTTGTTAATACAACAATATCAAGGGTTGATGAGAATGGGGTTGATGCAGAATCAAAAACTGAGGAGCAGCATGTGGAGACTATGGCTGATAATGGTTTAAATGTATCAGAATCTAAAACTGAGGAAAAGCTTGTGGATACAATGGTGGGTAATAGTGTAGTTGAATCCAAAAATGAGGAGCAACTTGTGGAGATGGTGGCGGATAATGGTGTAAGTGTAACAGAATCCAACAGCGAGAAGCTCGAGGAAATGATGGTTGATAAAAGAGTAACAGAATCTAAAAATGAGGAACAACATATGGAGAAAAACGAAAATGTAGATTTTTGA 999 0.4324 MEFKFRAIDNINPSTMQCSLSTVTCLPDRSLPMDGGFSGFRAPLATNEAALWREIEKEQIRRDMLRRMELEEEVRRELAMEGAFGIGTMQRPVNSLWSDSTPMMKNPVAVAVALDDRMGASKSQISDKDKLILLAKPDLDLYSAKRKAVTHDVLDDEPSAIGLNKKLKEEEWSCELCQIKASSENGLNDHLNGKKHKSREARQKRKIDEHDKKSEKTAKNATDAVVNTTISRVDENGVDAESKTEEQHVETMADNGLNVSESKTEEKLVDTMVGNSVVESKNEEQLVEMVADNGVSVTESNSEKLEEMMVDKRVTESKNEEQHMEKNENVDF 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00281 332 PANTHER OS06G0651300 PROTEIN-RELATED 1 329 - -
Mepo1g00281 332 MobiDBLite consensus disorder prediction 237 261 - -
Mepo1g00281 332 SUPERFAMILY beta-beta-alpha zinc fingers 168 204 IPR036236 -
Mepo1g00281 332 Pfam Zinc-finger of C2H2 type 172 196 - -
Mepo1g00281 332 SMART ZnF_U1_5 169 203 IPR003604 GO:0003676|GO:0008270
Mepo1g00281 332 Coils Coil 53 73 - -
Mepo1g00281 332 MobiDBLite consensus disorder prediction 185 221 - -
Mepo1g00281 332 MobiDBLite consensus disorder prediction 189 219 - -
Mepo1g00281 332 Gene3D Classic Zinc Finger 162 208 - -
Mepo1g00281 332 MobiDBLite consensus disorder prediction 312 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00281 Mepo-Chr1 2550391 2553569 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00281 129 283 C2H2 Transcription Factor Family AT2G19380 25.654 2.60e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00281 - - mtr:25494267 471.085