Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00263 ATGCCTCTCAGCTTCCTTCTTCTCCTTTTCTTCTTATTATTCCTCTCCCACCAACCTCTCTCTTCCGCTTCAGAGCCTCGCAACCCCGAAGTGGTGGCTTTAATGAGTATTAAAGAAGCACTAAATGATCCACACAATGTATTAAACAACTGGGATGAATTCTCTGTAGACCCTTGTAGTTGGTCTATGATTACTTGCTCTTCTGATTCCTTTGTTATTGGCCTGGGTGCTCCTAGTCAATCTCTCTCTGGAACTTTATCTTCAGCAATTGCTAATTTAACAAATCTTAAACAAGTGTTACTGCAGAATAACAATATCTCAGGCAAAATACCACCGGAACTTGGAAACCTTCCAAAGCTTCAAACTTTAGATCTTTCAAATAACAGATTCTCTGGGTTCATTCCATTTTCACTGAATCAATTGAATAGTCTTCAGTATATGAGGCTGAACAACAATAGCTTGACTGGACCCTTTCCTGTTTCACTGTCAAATATCACACAGCTTGCTTTCTTGGACTTGTCTTTTAACAATCTCACTGGACCGTTGCCTAAGTTTCCAGCTAGATCATTCAACATTGTGGGGAACCCATTAATTTGTGTAAGCACCTCTATTGAAGGCTGCTCTGGATCAGTGACCCTTATGCCTGTTCCTTTCTCTCAAGCAATATTACAAGGAAAACACAAGTCCAAGAAACTAGCAATTGCTCTTGGGGTTAGCTTTAGTTGTGTTTCTCTATTAGTCCTGTTTTTGGGGCTCTTTTGGTATAGAAAGAAAAGACAACATGGAGCCATCTTGTATATTGGTGATTATAAAGAAGAGGCTGTTGTTAGCTTAGGAAATCTCAAACATTTTGGTTTCAGAGAGCTCCAACACGCAACAGATAGTTTCAGCTCCAAAAATATACTTGGTGCTGGAGGTTTTGGCAATGTTTATAGAGGGAAGCTTGGAGATGGCACGTTGGTGGCTGTGAAAAGGTTGAAAGATGTAAATGGTAGTGCTGGCGAGTTACAGTTCCAAACAGAATTGGAGATGATTAGCTTGGCAGTTCACCGCAATTTACTTCGCTTAATTGGATATTGTGCTACTCCTAATGACAAAATTCTGGTTTACCCTTACATGTCTAATGGCAGTGTGGCCTCCAGGCTTAGAGGAAAACCTGCTTTAGATTGGAACACAAGAAAGAGGATAGCAATTGGAGCTGCTCGGGGCCTTCTGTATCTTCATGAGCAATGTGATCCAAAAATCATACACAGAGATGTAAAAGCTGCTAATGTGCTTTTGGATGATGATTATGAGGCTATCGTTGGTGATTTTGGCCTTGCAAAGCTCCTTGATCATGCTGATTCCCATGTCACCACTGCTGTACGTGGCACTGTTGGACACATTGCACCGGAGTACCTCTCGACTGGCCAATCATCTGAGAAAACTGATGTGTTTGGATTCGGCATTCTCTTATTAGAGCTTATAACTGGAATGACAGCCCTTGAGTTTGGGAAAACCTTGAATCAAAAGGGTGCTATGCTAGAGTGGGTTAATAAAATACAGCAAGAAAAGAAGGTTGAAGTTTTGGTGGACAAAGAACTAGGGAGCAACTATGATAGAATAGAGGTTGGGGAAATGCTTCAAGTAGCTTTGCTTTGCACCCAATATATGACAGCTCACCGGCCGAAAATGTCCGAAGTGGTCCGGATGCTTGAGGGAGACGGACTTGCTGAGAAGTGGGCATCGACACATAATTATGGAAGTAACTGCTGGAGCCATAGTCACAGCAACAACAGTAGTAGCAATAGCTCATCTCGTCCTACCACTACTTCAAAACATGATGAAAATTTTCATGATCGTTCAAGCATGTTTGGCATGACCATGGATGATGATGATGATCAGTCTTTGGATTCCTATGCCATGGAACTCTCTGGCCCTAGATAA 1926 0.418 MPLSFLLLLFFLLFLSHQPLSSASEPRNPEVVALMSIKEALNDPHNVLNNWDEFSVDPCSWSMITCSSDSFVIGLGAPSQSLSGTLSSAIANLTNLKQVLLQNNNISGKIPPELGNLPKLQTLDLSNNRFSGFIPFSLNQLNSLQYMRLNNNSLTGPFPVSLSNITQLAFLDLSFNNLTGPLPKFPARSFNIVGNPLICVSTSIEGCSGSVTLMPVPFSQAILQGKHKSKKLAIALGVSFSCVSLLVLFLGLFWYRKKRQHGAILYIGDYKEEAVVSLGNLKHFGFRELQHATDSFSSKNILGAGGFGNVYRGKLGDGTLVAVKRLKDVNGSAGELQFQTELEMISLAVHRNLLRLIGYCATPNDKILVYPYMSNGSVASRLRGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDDYEAIVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALEFGKTLNQKGAMLEWVNKIQQEKKVEVLVDKELGSNYDRIEVGEMLQVALLCTQYMTAHRPKMSEVVRMLEGDGLAEKWASTHNYGSNCWSHSHSNNSSSNSSSRPTTTSKHDENFHDRSSMFGMTMDDDDDQSLDSYAMELSGPR 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00263 641 MobiDBLite consensus disorder prediction 585 641 - -
Mepo1g00263 641 Pfam Protein tyrosine and serine/threonine kinase 299 565 IPR001245 GO:0004672|GO:0006468
Mepo1g00263 641 FunFam Somatic embryogenesis receptor kinase 1 267 372 - -
Mepo1g00263 641 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Mepo1g00263 641 ProSiteProfiles Protein kinase domain profile. 296 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00263 641 FunFam Somatic embryogenesis receptor-like kinase 1 373 584 - -
Mepo1g00263 641 FunFam Putative LRR receptor-like serine/threonine-protein kinase 27 209 - -
Mepo1g00263 641 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 5 575 - -
Mepo1g00263 641 Gene3D Transferase(Phosphotransferase) domain 1 373 583 - -
Mepo1g00263 641 ProSiteProfiles Leucine-rich repeat profile. 119 140 IPR001611 GO:0005515
Mepo1g00263 641 Pfam Leucine rich repeat 118 178 IPR001611 GO:0005515
Mepo1g00263 641 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Mepo1g00263 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Mepo1g00263 641 MobiDBLite consensus disorder prediction 605 621 - -
Mepo1g00263 641 MobiDBLite consensus disorder prediction 585 604 - -
Mepo1g00263 641 Gene3D Phosphorylase Kinase; domain 1 267 372 - -
Mepo1g00263 641 SUPERFAMILY L domain-like 28 200 - -
Mepo1g00263 641 Gene3D Ribonuclease Inhibitor 27 209 IPR032675 -
Mepo1g00263 641 SMART serkin_6 296 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00263 641 SUPERFAMILY Protein kinase-like (PK-like) 278 566 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00263 Mepo-Chr1 2388651 2393749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00263 4 641 Receptor kinase-like Gene Family AT5G16000 62.866 0.0 794
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mepo1g00263 PK_Tyr_Ser-Thr 2.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00263 - - gmx:100797186 1030.39