Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00262 ATGGCGAAAAAATCGCAGAAGCAAATAGAAAAAGACAATGCAAGCAATGATAACGATAATCTGAATGCAAGTAACACTGTCACCACCAAGGCAAAACGAACGAGGAAAAGTGTCCCTAGAACTTCTCCACCGCAACGCAGCTCAATATACAGAGGAGTCACTAGGCACCGTTGGACAGGCCGATATGAAGCTCATTTGTGGGACAAGAATTGTTGGAATGAGTCTCAGAACAAGAAAGGAAGACAAGTCTACCTTGGTGCTTATGATAATGAGGAGACGGCAGCACATGCTTATGATCTAGCAGCATTGAAATATTGGGGTCAAGATACCATTATTAATTTTCCGCTATCAAACTATCAGAAAGAACTAATTGAAATGGAGAGTCAATCAAGGGAGGAGTATATTGGATCCTTAAGAAGGAAAAGCAGTGGATTTTCACGGGGAGTGTCTAAATACAGAGGTGTAGCAAGACATCATCATAACGGAAGGTGGGAGGCACGGATTGGCAAAGTTTTTGGCAATAAGTATCTTTATCTCGGAACATATGCTACCCAAGAAGAAGCAGCTACAGCTTATGACATGGCAGCTATTGAATATCGTGGACTTAATGCTGTTACCAATTTCGATCTCAGCCGTTATATTAAGTGGCTTAAACCCAACAATAACAACAATGATGACAATAACAATTCCAATATTAATCTTTGTGACATTAACTCTAACAGTAGTACCAACGACTCAAACTCTAATGAAGAATTGGAATTTAGCCTCGTGGACAATGAAATATCACTCAATAATTCTATTGACGAAGGCACGTTGGTTCAATCTCGATCAACTAGTGCCACGTCAGCCCTAGAGCTTTTGCTTCAGTCATCTAAGTTTAAGGAAATGGTGGAAATGGCATCAATGACTTCCAATGTGTCAACAACGTTGGAGTCTGATCAGTTGTCACAATGTGCATTTCCCGATGACATTCAAACTTACTTTGAATATGAAAATTTCAATGATACCATGTTGGAAGACCTCAACTCCATTATGCCTACGTTCCATTATGACTTTGAAGGTGCTGAGGTTTTATAG 1077 0.3993 MAKKSQKQIEKDNASNDNDNLNASNTVTTKAKRTRKSVPRTSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQVYLGAYDNEETAAHAYDLAALKYWGQDTIINFPLSNYQKELIEMESQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGKVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNNNNNDDNNNSNINLCDINSNSSTNDSNSNEELEFSLVDNEISLNNSIDEGTLVQSRSTSATSALELLLQSSKFKEMVEMASMTSNVSTTLESDQLSQCAFPDDIQTYFEYENFNDTMLEDLNSIMPTFHYDFEGAEVL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00262 358 CDD AP2 48 117 IPR001471 GO:0003700|GO:0006355
Mepo1g00262 358 FunFam AP2-like ethylene-responsive transcription factor 150 211 - -
Mepo1g00262 358 MobiDBLite consensus disorder prediction 1 52 - -
Mepo1g00262 358 PRINTS Ethylene responsive element binding protein signature 50 61 IPR001471 GO:0003700|GO:0006355
Mepo1g00262 358 PRINTS Ethylene responsive element binding protein signature 191 211 IPR001471 GO:0003700|GO:0006355
Mepo1g00262 358 SUPERFAMILY DNA-binding domain 150 211 IPR016177 GO:0003677
Mepo1g00262 358 ProSiteProfiles AP2/ERF domain profile. 49 115 IPR001471 GO:0003700|GO:0006355
Mepo1g00262 358 MobiDBLite consensus disorder prediction 15 32 - -
Mepo1g00262 358 Gene3D AP2/ERF domain 150 211 IPR036955 GO:0003700|GO:0006355
Mepo1g00262 358 Gene3D AP2/ERF domain 49 117 IPR036955 GO:0003700|GO:0006355
Mepo1g00262 358 CDD AP2 150 211 IPR001471 GO:0003700|GO:0006355
Mepo1g00262 358 Coils Coil 4 24 - -
Mepo1g00262 358 Pfam AP2 domain 150 201 IPR001471 GO:0003700|GO:0006355
Mepo1g00262 358 Pfam AP2 domain 49 107 IPR001471 GO:0003700|GO:0006355
Mepo1g00262 358 ProSiteProfiles AP2/ERF domain profile. 151 209 IPR001471 GO:0003700|GO:0006355
Mepo1g00262 358 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 22 274 - -
Mepo1g00262 358 FunFam AP2-like ethylene-responsive transcription factor 48 117 - -
Mepo1g00262 358 SUPERFAMILY DNA-binding domain 48 117 IPR016177 GO:0003677
Mepo1g00262 358 SMART rav1_2 49 121 IPR001471 GO:0003700|GO:0006355
Mepo1g00262 358 SMART rav1_2 151 215 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00262 Mepo-Chr1 2359016 2361413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00262 45 213 AP2-EREBP Transcription Factor Family AT5G57390 73.373 3.59e-92 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mepo1g00262 AP2 4.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00262 K09285 - gmx:100793339 492.271