Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00252 ATGTTGTTCATATCTGTGATTGGTCAGGTGTTAAATGCAAGCAATAATAGAAGGATCATAGAGCTTGATCTTAGTGGAAAATCACTAGGAGGAACTATTTCCCCTGCTCTTGCTAACCTCTCTTTGTTGCAAATTCTTGACCTTTCTGGAAATCTTTTGGTGGGTCACATTCCTAGAGAATTAGGATATTTAGTTCACCTTGAACAACTTAGTTTATCTTGGAATTTACTTCAAGGAAACATTCCTTTAGAATTTGGTTCACTTCACAACTTGTACTACCTTGACTTGGGAAGCAATCAACTTGAGGGAGAGATTCCTCCACCCCTTTTATGCAATGTTACTTCATTGAGTTATATAGACCTCTCTAATAATTCATTAGGTGGAAAAATCCCATTAAACAATAAGTGTATCATTAAGGAGCTTAAGTTCTTCTTGCTTTGGTCTAACAAACTTGTAGGACAAGTTCCTTTGGTTCTTTCAAATTCTACTAAGCTTAAATGGCTTGATTTGGAGTCAAATATGTTGAGTGGAGAACTTCCATCTAAGATTATATGTAATTTTCCACAATTACAATTCCTCTACTTATCATATAACAATTTTGTTAGCCATGATGGTAACACTAACCTTGAACCTTTCTTTGCTTCTTTGATGAATTCGTCAAACTTCAAGAACTTGAATTGGCCAGAAACAGTCTCAGTGGGATGTTGCCTCATATTATTGTTGTCTAGTAACCGAATAAACGGAACAATACCTCGCAGCCTATGCAAGATTAATAGGCTAGAGAGAATTTATTTGTCAAACAATTATCTATCTGGTGAGATTCCTTCAACTCTTGGCGACATCCAACATCTTGGACTACTTGATTTGTCGAAAAACAAGCTTTCTGGTTCGATACCGGATAGTTTCGCAAAACTCACTCGGTTAAGAAGGCTTTTACTTTATGAAAACCACCTTTCTGGGACAATCCCACCAAGTCTAGGAAAACGTATCAACTTGGAGATTCCAGACTTGTCTCACAACAAGATCACAGGGATGATTCCTTCAGAAGTTGCAGCATTGACTAACTTGAAACTATACTTGAATTTATCAAACAATGAGTTACAAGGGAATTTACCATTAGAACTAAGCAAAATGGATATGGTGCTTGCTATTGACGTATCTATGAATAATTTCTCTGGTAGAATTCCACCACAACTTGAAAATTGTATAGCATTAGAATATCTCAATCTTTCTGGTAATTGCTTAGAAGGTCCTCTCCCTTATTCATTAGGCCAATTGCCTTATATTCAATCACTTGATGTATCTTCAAACCAATTGAATGGAACAATACCAGAGTCACTCCAGTTATGTTCCTATCTCAAAACACTTAACTTCTCTTTCAACAAATTCTCAGGAAAAGTCTCAAACAAAGGAGCGTTTTCATCTTCAACCATAGATTCTTTCCTAGGAAACAATAATCTATGTGGTCCATTTAAAGGCATGAAACAATGTCATAGGAAAAAAAGTTATCATTTGGTGTTTTTGTTAGTTCCTGTGTTGCTATCTGGCACACCTGTGATATGCATGTGTAGGAACTCCACAATAATCAAGTCGAAAGTGAGAAAGAAACTTCAAACCGTTAGTAACAGATGTGACTTGGAGGATGAAGAAGAGGAAACAAAAGAGACCAAGCATCCAATAATTTCATATAGACAACTTAGAGAAGCCACTGGAGGGTTCAATGCTTCAAGCCTCATCGGTTCAGGTCAGTTCGGACGAGTTTACAAAGGTGTCCTCCTAGATAATACAAGAGTAGCAGTGAAAGTATTAGATACAACAAAAGATAATGAGATATCATGGAGCTTTAGAAGGGAATGCCAAATCCTTAAAAAGATAAGGCACAGAAATTTAATAAGGATCATTACAGTTTGCAACAAACAAGAATTTAAGGCTATTGTTCTTCCACTGATGTCAAATGGTAGTCTTGAGAGGAACCTATATGATCCAAACCATGAGTTAAGTCATAGGTTAGATGTGATTCAATTAGTGAGGATTTGTAGTGATGTAGCTGAGGGAATGTGTTATCTGCACCATTATTCTCCTGTGAAAGTTGTGCATTGTGATCTTAAGCCTAGCAATATACTACTTGATGATGACTTTACAGCTTTGGTCTCCGATTTTGGAATTTCAAGGCTTCTAAAAGGCGATGCCAATACTTCTACATGTAACTCAACATCTTTCAGTTCAACTCATGGCTTGTTGTGTGGCTCTGTTGGTTATATTGCTCCTGAATATGGAATGGGAAAACAAGCTTCAGTTGAGGGTGATGTTTTCAGTTTTGGAGTGATTCTGTTAGAAATAGTGACAGGTAGACGCCCTACCGATGTCCTTGTCCATGAAGGCTCTAGCTTGCATGAATGGGTTAAGAGACAATACATACAGCCACATAAACTTGAAAACATTGTTGAACATGCACTTCAAAGGTTCTCTCTTTCTTGTGCGTTAAGGCATGGTAGTAAAATTTGGGAAGATGTTATGTTGGAACTCATTGAGCTAGGGCTAGTCTGCACACAACAGAACCCTTCAACAAGACCAACCATGCTTGGTGTAGCACAAGAGATGGGGAGGTTGAAGGATTACCTCACCAATTCTTTCATAAGAGAAGATAGTTTAATTGAAAAGTAA 2664 0.3727 MLFISVIGQVLNASNNRRIIELDLSGKSLGGTISPALANLSLLQILDLSGNLLVGHIPRELGYLVHLEQLSLSWNLLQGNIPLEFGSLHNLYYLDLGSNQLEGEIPPPLLCNVTSLSYIDLSNNSLGGKIPLNNKCIIKELKFFLLWSNKLVGQVPLVLSNSTKLKWLDLESNMLSGELPSKIICNFPQLQFLYLSYNNFVSHDGNTNLEPFFASLMNSSNFKNLNWPETVSVGCCLILLLSSNRINGTIPRSLCKINRLERIYLSNNYLSGEIPSTLGDIQHLGLLDLSKNKLSGSIPDSFAKLTRLRRLLLYENHLSGTIPPSLGKRINLEIPDLSHNKITGMIPSEVAALTNLKLYLNLSNNELQGNLPLELSKMDMVLAIDVSMNNFSGRIPPQLENCIALEYLNLSGNCLEGPLPYSLGQLPYIQSLDVSSNQLNGTIPESLQLCSYLKTLNFSFNKFSGKVSNKGAFSSSTIDSFLGNNNLCGPFKGMKQCHRKKSYHLVFLLVPVLLSGTPVICMCRNSTIIKSKVRKKLQTVSNRCDLEDEEEETKETKHPIISYRQLREATGGFNASSLIGSGQFGRVYKGVLLDNTRVAVKVLDTTKDNEISWSFRRECQILKKIRHRNLIRIITVCNKQEFKAIVLPLMSNGSLERNLYDPNHELSHRLDVIQLVRICSDVAEGMCYLHHYSPVKVVHCDLKPSNILLDDDFTALVSDFGISRLLKGDANTSTCNSTSFSSTHGLLCGSVGYIAPEYGMGKQASVEGDVFSFGVILLEIVTGRRPTDVLVHEGSSLHEWVKRQYIQPHKLENIVEHALQRFSLSCALRHGSKIWEDVMLELIELGLVCTQQNPSTRPTMLGVAQEMGRLKDYLTNSFIREDSLIEK 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00252 887 SUPERFAMILY Protein kinase-like (PK-like) 555 865 IPR011009 -
Mepo1g00252 887 Pfam Leucine Rich Repeat 405 424 IPR001611 GO:0005515
Mepo1g00252 887 ProSitePatterns Protein kinases ATP-binding region signature. 579 601 IPR017441 GO:0005524
Mepo1g00252 887 SUPERFAMILY L domain-like 231 489 - -
Mepo1g00252 887 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 5 230 - -
Mepo1g00252 887 Gene3D Ribonuclease Inhibitor 139 229 IPR032675 -
Mepo1g00252 887 Gene3D Ribonuclease Inhibitor 8 138 IPR032675 -
Mepo1g00252 887 PANTHER RECEPTOR-LIKE PROTEIN 55 239 868 - -
Mepo1g00252 887 SMART LRR_typ_2 281 304 IPR003591 -
Mepo1g00252 887 SMART LRR_typ_2 40 64 IPR003591 -
Mepo1g00252 887 SMART LRR_typ_2 88 112 IPR003591 -
Mepo1g00252 887 SMART LRR_typ_2 305 329 IPR003591 -
Mepo1g00252 887 SMART serkin_6 573 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00252 887 ProSitePatterns Serine/Threonine protein kinases active-site signature. 697 709 IPR008271 GO:0004672|GO:0006468
Mepo1g00252 887 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 650 879 - -
Mepo1g00252 887 SUPERFAMILY L domain-like 14 203 - -
Mepo1g00252 887 Gene3D Phosphorylase Kinase; domain 1 544 648 - -
Mepo1g00252 887 Gene3D Ribonuclease Inhibitor 237 505 IPR032675 -
Mepo1g00252 887 Pfam Protein kinase domain 575 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00252 887 ProSiteProfiles Protein kinase domain profile. 573 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00252 887 FunFam Leucine-rich repeat receptor-like protein kinase TDR 231 499 - -
Mepo1g00252 887 CDD STKc_IRAK 579 870 - -
Mepo1g00252 887 Gene3D Transferase(Phosphotransferase) domain 1 650 883 - -
Mepo1g00252 887 Pfam Leucine rich repeat 259 318 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00252 Mepo-Chr1 2283233 2286540 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00252 15 872 Receptor kinase-like Gene Family AT3G47570 35.548 1.17e-146 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo1g00252 Pkinase 6.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00252 - - tpra:123909601 1233.01