Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00247 ATGGAAGCCAGCGCCGGATTAGTCGCTGGTTCTCACAACCGGAACGAGCTTGTTGTCATTCATGGCCATGAAGAGCACAAGCCTTTGAAGAACTTGGACGGTCAAGTGTGTGAGATATGTGGTGATGATGTTGGACTCACTGTGGATGGAGATTTGTTTGTGGCATGCAACGAGTGTGGTTTTCCGGTGTGCCGGCCTTGCTATGAGTATGAAAGAAGGGAAGGGAGACAACTTTGTCCTCAGTGCAAGACCAGATACAAGCGTCTCAAAGGGAGCCCTCGGGTTGAGGGAGACGATGATGAGGAGGATGTGGACGATATTGAACATGAATTCAAAATTGAAGACAAAATGAACAATCACGATCATTCTGCTGAGGCCATGCTGCATGGGAAGATGAGCTACGGAAGAGGTCCTGAAGATGATGAGAATGCACACTTCCCAGCTGTTATTGCTGGCGGTCGCTCTCGGAATGTGAGTGGTGAGTTCCCAATATCATCTCATAGTTACGGAGAGCAGATGTTATCTTCACTTCATAAAAGAGTGCATCCATATTCCGCTTCTGATCCTCGAAGTGCAGGGTGGGATGAAAGGAGAGAAGATGGATCATATGATAGAATGGATGACTGGAAATTGCAGCAAGGAAATTTGGGACCTGAACCTGATGAAGATCTAGATGCAAACATGTCAGATGAAGCAAGACAACCACTGTCAAGGAAGGTACCAATAGCATCTAGCAAAATCAATCCATATAGGATGGTGATCGTGGCACGGCTTGTTATTCTTGGCTTCTTCCTCCGATACAGACTTATGAACCCAGTGCATGATGCAATGGGGCTATGGCTAACTTCAATTATATGTGAAATCTGGTTTGCTATATCATGGATCCTTGATCAGTTCCCCAAATGGTATCCTATTGATAGAGAAACATACCTTGACCGTCTTTCACTCAGGTATGAGCGTGAAGGCGAACCCAATATGCTTGCTCCTGTAGATGTGTTTGTTAGTACTGTGGATCCCTTGAAGGAACCTCCTCTGAATACAGCCAACACAGTTCTTTCAATCTTGGCAATGGACTACCCCATTGATAAGATATCATGCTACATTTCTGATGACGGAGCTTCAATGTGTACATTTGAAGCCCTTTCGGAAACGGCAGAGTTTGCTAGGAAGTGGGTACCATTTTGTAAGAAATTTTTGATAGAACCTCGTGCACCAGAGATGTACTTCTCTGAGAAAATTGACTATCTAAAGGACAAGGTGCAGCCAACTTTTGTCAAAGAACGTCGGTCCATGAAGAGAGAATATGAAGAGTTTAAGGTTAGGATTAATGCACTTGTGGCAAAAGCTCAGAAGGTTCCTGCAGGAGGGTGGATTATGCAGGATGGGACCCCATGGCCAGGAAACAATACCAAGGATCATCCTGGTATGATTCAAGTCTTTCTTGGTCACAGTGGAGGTCATGATAGTGAAGGAAACCAGCTTCCTCGCCTTGTTTATGTATCTAGAGAAAAAAGGCCAGGATTTCAACACCACAAGAAAGCCGGCGCCATGAATGCTCTGGTACGGGTCTCTGCAGTGCTTACAAATGCTCCTTTCATGCTGAACTTGGATTGTGATCATTATATCAATAACAGCAAGGCTGTCCGTGAGGCCATGTGCTTCTTGATGGACCCTCAAACAGGGAAGAAAGTTTGCTATGTCCAGTTTCCTCAAAGATTCGATGGCATTGATGCGCATGATCGATATGCTAATAGGAACACAGTTTTCTTTGATATTAACATGAAGGGTCTAGATGGTATTCAGGGTCCTGTATATGTCGGCACAGGGTGTGTATTTAGAAGGCAGGCTTTATATGGATATAATCCTCCTAAGGGTCCCAAGCGTCCAAAAATGGTAAGTTGTGATTGCTGCCCATGTTTTGGAAGGCGCAAGAAGGTTAAGCATGCAATGAACGACGCAAATGGAGAAGCTGCAGGCCTAAGAGGAATGGAAGATGACAAAGAGTTACTGATGTCCCAGATGAATTTTGAGAAGAAATTTGGGCAGTCATCAATTTTTGTGACTTCAGTCTTGATGGAAGAGGGTGGTGTACCTCCTTCGTCAAGTCCAGCAAGCCAACTTAAAGAAGCCATTCATGTAATCAGTTGCGGATATGAAGATAAAACTGAATGGGGGATTGAGCTTGGTTGGATTTATGGGTCTATTACAGAGGATATTCTAACAGGCTTTAAGATGCATTGCCGTGGTTGGAGATCCATTTACTGTATGCCAAAGAGAGTAGCATTCAAGGGTACTGCTCCTATCAACTTGTCAGATAGACTCAACCAGGTGCTTCGTTGGGCTCTTGGCTCCATTGAGATCTTCTTCAGTCATCATTGCCCTTTATGGTATGGCCACAAGGACGGGAAGCTGAAGTGGCTGGAGCGATTTGCCTATGCAAACACAACCGTCTACCCCTTCACCTCCATACCTCTAGTTGCCTACTGTATTCTTCCAGCTGTCTGCTTACTCACTGACAAATTCATCATGCCACCGATAAGCACTTTTGCTAGTTTGTACTTTGTTGCTCTCTTCTCTTCAATCATGGCAACGGGCATTCTTGAGTTGAAATGGAGTGGAGTCAGCATTGAGGAATGGTGGAGAAATGAGCAATTCTGGGTCATTGGTGGTGTATCAGCACATCTCTTTGCTGTCATACAAGGGCTTCTGAAGGTTCTTGCTGGAATTGACACCAACTTCACTGTTACATCCAAGGCAACAGATGATGAGGAATTTGGAGAATTATACGCCATCAAGTGGACCACTCTCCTAATTCCTCCAACGACTATCTTAATAATCAATATTGTTGGGGTTGTTGCTGGCATCTCAGACGCCATAAACAATGGTTACCAATCATGGGGACCTCTATTTGGAAAACTCTTCTTTTCCTTCTGGGTGATTGTCCATCTATATCCATTCCTTAAAGGTTTGATGGGTCGGCAAAACCGCACCCCCACCATTGTTGTGATATGGTCAGTGTTGTTGGCTTCCATTTTCTCTTTGTTATGGGTAAGAATTGACCCATTCGTGCTAAAAACTAAGGGACCTGATACCAAGCTATGTGGAATCAACTGTTAA 3117 0.4443 MEASAGLVAGSHNRNELVVIHGHEEHKPLKNLDGQVCEICGDDVGLTVDGDLFVACNECGFPVCRPCYEYERREGRQLCPQCKTRYKRLKGSPRVEGDDDEEDVDDIEHEFKIEDKMNNHDHSAEAMLHGKMSYGRGPEDDENAHFPAVIAGGRSRNVSGEFPISSHSYGEQMLSSLHKRVHPYSASDPRSAGWDERREDGSYDRMDDWKLQQGNLGPEPDEDLDANMSDEARQPLSRKVPIASSKINPYRMVIVARLVILGFFLRYRLMNPVHDAMGLWLTSIICEIWFAISWILDQFPKWYPIDRETYLDRLSLRYEREGEPNMLAPVDVFVSTVDPLKEPPLNTANTVLSILAMDYPIDKISCYISDDGASMCTFEALSETAEFARKWVPFCKKFLIEPRAPEMYFSEKIDYLKDKVQPTFVKERRSMKREYEEFKVRINALVAKAQKVPAGGWIMQDGTPWPGNNTKDHPGMIQVFLGHSGGHDSEGNQLPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQTGKKVCYVQFPQRFDGIDAHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYNPPKGPKRPKMVSCDCCPCFGRRKKVKHAMNDANGEAAGLRGMEDDKELLMSQMNFEKKFGQSSIFVTSVLMEEGGVPPSSSPASQLKEAIHVISCGYEDKTEWGIELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRVAFKGTAPINLSDRLNQVLRWALGSIEIFFSHHCPLWYGHKDGKLKWLERFAYANTTVYPFTSIPLVAYCILPAVCLLTDKFIMPPISTFASLYFVALFSSIMATGILELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKATDDEEFGELYAIKWTTLLIPPTTILIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGPDTKLCGINC 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00247 1038 MobiDBLite consensus disorder prediction 180 232 - -
Mepo1g00247 1038 ProSiteProfiles Zinc finger RING-type profile. 37 83 IPR001841 -
Mepo1g00247 1038 CDD mRING-HC-C4C4_CesA 35 85 - -
Mepo1g00247 1038 SUPERFAMILY RING/U-box 21 107 - -
Mepo1g00247 1038 FunFam Cellulose synthase 19 110 - -
Mepo1g00247 1038 Pfam Cellulose synthase 330 1032 IPR005150 GO:0016020|GO:0016760|GO:0030244
Mepo1g00247 1038 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Mepo1g00247 1038 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 475 621 IPR029044 -
Mepo1g00247 1038 FunFam Cellulose synthase 447 621 - -
Mepo1g00247 1038 MobiDBLite consensus disorder prediction 191 207 - -
Mepo1g00247 1038 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 233 1005 - -
Mepo1g00247 1038 SUPERFAMILY Nucleotide-diphospho-sugar transferases 344 815 IPR029044 -
Mepo1g00247 1038 Coils Coil 428 448 - -
Mepo1g00247 1038 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 109 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00247 Mepo-Chr1 2235356 2240847 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00247 1 1038 Cell Wall Biosynthesis AT5G17420 85.371 0.0 1828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00247 K10999 - gmx:100779834 1999.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00247 1 2235356 2240847 Mepo1g00247 1 2235356 2240847 ECH