Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00236 ATGGAGTTCAAATTCCGTGCTATCGACAACATCAATCCATCAACCATGCAGCGTTCTCTTCCCACCGTCACATATCTCCCTGATCGATCTCTTCCAATGGACGGTGGTTTTTCTGGCTTCCGAGCACCGTTGGCAACCAATGAGGCGGCATTACAGCGAGAGATCGAGAAGGAACAAATCCGGCGGGATATGTTGCGGCGGATGGAGTTGGAGGACGAAGTGCGGAGGGAGCTTGCAATGGTGGGGGCGTTTGGAACTATGCAGAGGCCTCTCAATTCTCCGTGGTCAAATTCTACACCGACGATGATGAACCCTGTTGCTGTTGATGATCACATCGGTGCTTCAAAACCACCATTGACTATGGCCCCTCCTGAAATCAAACATTCTCCACAGACCAGTGACAAGGACAAAGTTATTCTATTGGCTAAGCCAGACCCCGATCTCTATGGTGCAAAGCGAAAAGCAGCGACACCTGATGCTCCTAATGATGAGCCTAGTGAAATTGGTATGAAGAAAAAACCAAAGGAAGAGTGGAGTTGTGAACTGTGCCAAATTAAAGCCACGAGTGAGAGTGGCTTGAATGCTCATCTGAATGGTAAGAAGCACAAGGCCAAGGAAGCGGGACAAAAAAGGAAGATTGACAAGCGCAACAGGAAAAGTCAAAAAACTGCTGAAAAGATTACTGAAACAATTGTTGTTAATACAACAAAGTTCGGTGTTGATGTGGAAACAGATCAACAACCTCCTCAACCTTGCTTAGCCTTGGAAGTCATGAATGAAACTATGGTTGATAAGGGTCTCACAAAATCTAATAAAGAGGAGCAGCTTGTGGAGATGATGCTTGATAATGGTGTTACCAAATCCAATGATGAGAAGCTTGTGGAGATGATGGCTGATAATGGTGTAGCCAAACTTGAAAATGAGGAGCAGGTTCTGGAGATCGTTGCTGATAATGGTGAAAATATAACAACATCCAAAAATGAGAAGAAGCTTGTGGAGATGGTTGCTGATAATGGTGTAACAACATCCCAAAATGAGAAGAAGCTTATGGAGATGAAGGCTGATAAGGATATAACAGAATCTAAAATTGAGGAGCAGCTTGTGGAGAAAAGCCAAAAGATAGGTTTTTCCGGGTGTAGAAGTGACGCTGCAACCGACGAAGCATGGAAGGAAATTGCATTGACAAAAAGGAGGAAGGTTGGACGTTTATGGTGTGAGCATTGTCAAATTGGCGCTTTCTCACAAGCTGTGATGGAAGACCACATGAAAGGGAAAAAACACATAAAGAATATGAAGAAACTCCATCAAAAAAATGCAAGTCCTACATCAACATCCTCTATATCACAAAAAATTCATTTGTTGATCAATGATACAGATGGTGTTAACAAAGAAACAGACCAAGTAATGACACTTTTAGGGAAAGGAGAACCAATACTAAAGATGGAAAATAATTTTTGA 1458 0.428 MEFKFRAIDNINPSTMQRSLPTVTYLPDRSLPMDGGFSGFRAPLATNEAALQREIEKEQIRRDMLRRMELEDEVRRELAMVGAFGTMQRPLNSPWSNSTPTMMNPVAVDDHIGASKPPLTMAPPEIKHSPQTSDKDKVILLAKPDPDLYGAKRKAATPDAPNDEPSEIGMKKKPKEEWSCELCQIKATSESGLNAHLNGKKHKAKEAGQKRKIDKRNRKSQKTAEKITETIVVNTTKFGVDVETDQQPPQPCLALEVMNETMVDKGLTKSNKEEQLVEMMLDNGVTKSNDEKLVEMMADNGVAKLENEEQVLEIVADNGENITTSKNEKKLVEMVADNGVTTSQNEKKLMEMKADKDITESKIEEQLVEKSQKIGFSGCRSDAATDEAWKEIALTKRRKVGRLWCEHCQIGAFSQAVMEDHMKGKKHIKNMKKLHQKNASPTSTSSISQKIHLLINDTDGVNKETDQVMTLLGKGEPILKMENNF 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00236 485 SMART ZnF_U1_5 400 434 IPR003604 GO:0003676|GO:0008270
Mepo1g00236 485 SMART ZnF_U1_5 175 209 IPR003604 GO:0003676|GO:0008270
Mepo1g00236 485 MobiDBLite consensus disorder prediction 197 224 - -
Mepo1g00236 485 SUPERFAMILY beta-beta-alpha zinc fingers 399 434 IPR036236 -
Mepo1g00236 485 SMART c2h2final6 403 427 IPR013087 -
Mepo1g00236 485 SMART c2h2final6 178 202 IPR013087 -
Mepo1g00236 485 MobiDBLite consensus disorder prediction 210 224 - -
Mepo1g00236 485 Pfam Zinc-finger of C2H2 type 178 202 - -
Mepo1g00236 485 Pfam Zinc-finger of C2H2 type 404 427 - -
Mepo1g00236 485 MobiDBLite consensus disorder prediction 149 173 - -
Mepo1g00236 485 PANTHER OS06G0651300 PROTEIN-RELATED 1 443 - -
Mepo1g00236 485 SUPERFAMILY beta-beta-alpha zinc fingers 156 210 IPR036236 -
Mepo1g00236 485 Gene3D Classic Zinc Finger 385 436 - -
Mepo1g00236 485 Gene3D Classic Zinc Finger 159 209 - -
Mepo1g00236 485 Coils Coil 48 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00236 Mepo-Chr1 2150647 2154501 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00236 125 242 C2H2 Transcription Factor Family AT2G19380 30.579 7.16e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00236 - - mtr:11441074 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00236 1 2150647 2154501 Mepo1g00236 1 2150647 2154501 ECH