Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00231 ATGGGGATGCTTCTTTCACAAATGTTTTTCCCTCTAATCATGTTTATTAGTGGTTGTTTTTGTCTTAGTAGAGCCCAAGATTGTGGTGGAAGTAATGTTCAAAATACAGTCATTGTTGACCAACAATCGGGAAAGGGTAACTTCACAACAATCAAATCTGCCATATATTCTATAAAGCAAAATAACAATCAATGGTTTAAGATTCACATAAATCCGGGCGTCTATTGGGAAAAGATTAATATTCCCATTTCGAGTCCATGTATCATTTTAGAAGGATCCGGGAGTAACACAACAACAATTATTTCTAATCAACGTGAAAGAACATCAGATTGGGGATCTACATTCAGTTCATTCGCAACTAATGTGATTGTGAGTGACATTACTTTCAAGAACTCATATAATTTGGAAGGAGGGTCGAATAATATCAAACAAGCATTGTCAGCTGCTTTCTACGGAGACAAATCTGCAATCTTTAACTGTAGTTTTATGAGTTATCAAGATACTTTGTTTGCAGCAAGGGGACGACACTATTTTAAAGACTGTTATATTCAAGGTGATGTCGACTTTATTTTTGGTTCTGGCCAATCTTATTTTGAGAATTGTCTGATAAACGCCACACAGAAGAATTCGATTCCTTCAGGTTTTGTGACTGCTCAACGTAGGGAAAATGATTCTGATACAAGTGGTTTTGTTTTTAGAGAAGGGTCTGTTGTTGGAAATGGTGAAGTGGCTCTAGGAAGACCTTGGGGTCCATATTCAAGAGTTATATTTTGGGAAACATATTTTTCATCTGTGGTAACTCCACAAGGATGGAGTGCTTGGCATAATACTCAAGTGTAA 840 0.3655 MGMLLSQMFFPLIMFISGCFCLSRAQDCGGSNVQNTVIVDQQSGKGNFTTIKSAIYSIKQNNNQWFKIHINPGVYWEKINIPISSPCIILEGSGSNTTTIISNQRERTSDWGSTFSSFATNVIVSDITFKNSYNLEGGSNNIKQALSAAFYGDKSAIFNCSFMSYQDTLFAARGRHYFKDCYIQGDVDFIFGSGQSYFENCLINATQKNSIPSGFVTAQRRENDSDTSGFVFREGSVVGNGEVALGRPWGPYSRVIFWETYFSSVVTPQGWSAWHNTQV 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00231 279 ProSitePatterns Pectinesterase signature 2. 183 192 IPR033131 -
Mepo1g00231 279 Gene3D - 23 279 IPR012334 -
Mepo1g00231 279 Pfam Pectinesterase 41 277 IPR000070 GO:0030599|GO:0042545
Mepo1g00231 279 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 31 277 - -
Mepo1g00231 279 SUPERFAMILY Pectin lyase-like 33 277 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00231 Mepo-Chr1 2111855 2113708 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00231 9 275 Carbohydrate Esterase AT2G19150 39.259 5.17e-63 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00231 - - mtr:11437296 328.561