Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00225 ATGGCTGAGCATCGCGTCTCTCAAGCTCTCCCAGAACAACAAAAAGCTCAAGATATAAAGGAACCAGTCGGTGAATCACCGTCAGCCACCGAGTCGCAGAAAACCGAATTACCTACTTCTAATGAAACCCTAATTGCTTTTCCATCTTCGGTTTTGGATCAAGATGTGCAGGGAATCCCTAATATGGTGAATTCGGTTGCCAAATCCGAAATTAAGGAAACGGTTGGACCTCCTGAAAATGAAAAGGAAGTTGCTAAAAGAGAAGCTGCCCAGGAACCTTCAACTCAGGCCGAATATCAAATTCAAGTGACCGTGTCGTTAACTCCACCGTCTGAACTATCACCGAATTCTGTTACAAAATCTTTATCATCCGTTCCTAGTACAACCATACAAATACAGAATATGTCTCCTCCAAACGTTAGTAATACGCCTGTGGCAGAAGTAAACAAAAAAAATACTTCTGGTGGTAGAGCCTTGTCTTCTGTTTCTGTTCCAAGGACACCATCATCTGATGGATTCAACTGGCGGAAATATGGACAGAAGCAAGTTAAGAGTCCTACTACAGGTTCTCGAAGCTATTACAGGTGTACTCAATCAAACTGTTGTGCTAAGAAGATTGAATGCTGGGATCATTCAGGTCATGTGATAGAGACTGTTTATAAAAGTGAGCACAGTCATGATCCCCCGCGGAAGATTAGTTCCATTAGGGAAAGTAAGTTTGCGCCCTCCAACGAACCGACTGCAGAGAACAGTGTTTTAGTGAAGCCTGTCAATGCTCTGAAAGATTCTGATCCATCCACATCTTCCAAAGCTCAAGAAGAAACACCTTGCAGTTCTGACAAGAAACCACAAAACTCATCTGATATCAATGGTAATGGTAAAATAGTTTTGAACGAGGAACGTGTAGACGAGCCAGATCCAAAACGAAGAAAGGATAAAGGCGACTTGGTTCACTCAGATTCTCCTGTAAAACCTGAAAAGAAACCCAAGTTTGTTGTACATGCAGCAGGAGATGTGGGGATATCTGGTGATGGATACCGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGTAACCCACATCCCAGAAACTACTACAGATGCACTTCTGCTGGATGTCCTGTTCGAAAGCACGTTGAGACTGCCGTAGACAACTCAGATGCTGTCATCATAACTTACAAGGGTGTACATGATCATGACACTCCTGTGCCAAAGAAACGACACGGCCCACCAAGTGCTCCTCTTGTGGCTGCTGCAGCACCTGCCTCCATGAATAATTTGCAGTGCCCATCAAGTGCTCCTCTTATGGCTGATGCAGCACCTGCCTCCATGAATAATTTGCAGTTGAGTAAACCGGACTCGCTGCAAAATCAGAAAATTTCTACTCAATGGTCAGTGGACACAGAAGGAGAACTAACTGGGGAAGCAAAGGACCTTGGGGGTGAGAAAGCAATAGAGTCGGCTCGAACGCTTCTGAGCATAGGTTTTGAAATCAAGCCTTGCTGA 1506 0.4449 MAEHRVSQALPEQQKAQDIKEPVGESPSATESQKTELPTSNETLIAFPSSVLDQDVQGIPNMVNSVAKSEIKETVGPPENEKEVAKREAAQEPSTQAEYQIQVTVSLTPPSELSPNSVTKSLSSVPSTTIQIQNMSPPNVSNTPVAEVNKKNTSGGRALSSVSVPRTPSSDGFNWRKYGQKQVKSPTTGSRSYYRCTQSNCCAKKIECWDHSGHVIETVYKSEHSHDPPRKISSIRESKFAPSNEPTAENSVLVKPVNALKDSDPSTSSKAQEETPCSSDKKPQNSSDINGNGKIVLNEERVDEPDPKRRKDKGDLVHSDSPVKPEKKPKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHVETAVDNSDAVIITYKGVHDHDTPVPKKRHGPPSAPLVAAAAPASMNNLQCPSSAPLMADAAPASMNNLQLSKPDSLQNQKISTQWSVDTEGELTGEAKDLGGEKAIESARTLLSIGFEIKPC 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00225 501 SUPERFAMILY WRKY DNA-binding domain 165 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo1g00225 501 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 117 439 IPR044810 GO:0003700
Mepo1g00225 501 Pfam WRKY DNA -binding domain 344 399 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g00225 501 Pfam WRKY DNA -binding domain 171 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g00225 501 MobiDBLite consensus disorder prediction 239 330 - -
Mepo1g00225 501 Gene3D WRKY domain 328 403 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo1g00225 501 Gene3D WRKY domain 156 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo1g00225 501 ProSiteProfiles WRKY domain profile. 170 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g00225 501 MobiDBLite consensus disorder prediction 1 41 - -
Mepo1g00225 501 SMART WRKY_cls 169 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g00225 501 SMART WRKY_cls 342 401 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g00225 501 SUPERFAMILY WRKY DNA-binding domain 338 402 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo1g00225 501 MobiDBLite consensus disorder prediction 93 192 - -
Mepo1g00225 501 MobiDBLite consensus disorder prediction 26 41 - -
Mepo1g00225 501 MobiDBLite consensus disorder prediction 261 293 - -
Mepo1g00225 501 MobiDBLite consensus disorder prediction 74 89 - -
Mepo1g00225 501 MobiDBLite consensus disorder prediction 297 330 - -
Mepo1g00225 501 ProSiteProfiles WRKY domain profile. 337 402 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g00225 501 MobiDBLite consensus disorder prediction 69 192 - -
Mepo1g00225 501 FunFam WRKY transcription factor 328 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00225 Mepo-Chr1 2032406 2037442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00225 117 501 WRKY Transcription Factor Family AT4G30935 54.639 2.12e-123 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo1g00225 WRKY 9.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00225 - - mtr:11440414 926.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00225 1 2032406 2037442 Mepo1g00225 1 2032406 2037442 ECH