Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo1g00223 | ATGGGTTTAGGAGTATTTGGATCTGTTTTGGTTTTGACATTTTTGTTCAAGCATTTAGCTTCACAGCAACCAAACACTGATGAATTCTATGTCTCTGAGTTTTTGAAGAAAATGGGTTTAACATCATCCTCCAAAGTTTACAACTTTTCATCTTCTGTTTGTTCTTGGAAAGGTGTTTATTGTGATTCCAATAAGGAACATGTTGTTGAATTGAACCTTTCTGGTATTGGTCTTACTGGTCCTATTCCTGATACAACCATAGGCAAACTCAACAAACTTCACTCTCTGGATCTTAGCAACAACAAAATCACTGCTTTGCCTTCAGATTTTTGGAGTTTAACCTCTCTCAAAAGCCTTAATCTTTCTTCCAATAAGATTTCAGGTTCATTGACTAACAACATTGGAAACTTTGGTTCACTTGAAAACTTTGACTTGTCAAAAAACAGTTTCTCTGATGAAATTCCTGAAGCTTTGAGTTCCCTTGTGAGTTTGAAGGTTCTCAAACTTGACCACAATATGTTTGTTAGAAGCATTCCTTCAGGGATTCTTAAGTGTCAGTCTCTAGTTTCAATTGATCTTTCATCTAATCAGCTGAGTGGAACACTTCCACATGGTTTTGGTGATGCTTTTCCTAAGCTTAGGACTTTGAACCTTGCTGAGAATAATATCTATGGTGGTGTGTCAAATTTTTCAAGGTTGAAGTCTATTGTGAGTCTCAACATTTCAGGAAATTCATTTCAAGGTTCTATTATAGATGTCTTTGTGCTAAAGTTGGAGGCTTTGGACCTTAGCAGAAACCAATTTCAAGGTCACATTTCTCAGGTAAAGTACAACTGGTCTCATTTAGTTTATCTGGATTTGTCTGAGAATCAGCTTAGTGGAGAAATTTTCCAAAGCTTGAACAATTCAATGAATTTAAAGCACCTTAGTCTTGCATGCAATAGATTTTCAAGACAGAAATTCCCAAAGATTGAAATGCTCCTAGGATTGGAATATCTTAATTTGTCTAAAGCTAGTCTTGTTGGTCACATTCCTGATGAAATCTCACATCTTGGTAATTTGAATGCACTTGATCTTTCTATAAATCATCTTGATGGAAAAATTCCCTTACTGAAGAATAAACTTCTTCAAGTTATTGACTTTTCACATAACAATTTGAGTGGACCAGTCCCTTCATCTATCTTGAAGAATCTCCCAAAGATGAAGAAATATAACTTCTCTTATAATAACTTAACCCTTTGTGCCTCAGAAATCAAGCCTGATATCATGAAAACATCGTTCTTTGGATCAGTTAACAGCTGCCCAATAGCTGCAAATCCGAGTTTTTTCAAAAAAAGAAGAGACGTCGGCCACAGGGGAATGAAGCTAGCTCTTGTATTAACCCTCTCATTGATATTTGCGCTTGCTGGTATTCTGTTTCTAGCCTTTGGTTGCAGAAGGAAAAATAAAATGTGGGAAGTGAAACAAGGTTCTTACAGAGAAGAACAGAATATCTCAGGTCCATTTTCTTTCCAAACTGATTCAACAACTTGGGTAGCTGATGTCAAACAAGCAACATCAGTTCCGGTAGTAATCTTTGAGAAGCCCTTGTTGAATATTACATTTGCAGATCTCTTATCTGCAACTTCAAATTTTGATAGAGGTACCCTTTTGGCTGAAGGAAAATTTGGACCTGTTTATCGAGGCTTTCTACCTGGAAATATTCATGTAGCAGTTAAAGTGTTGGTTGTGGGTTCTACATTGACAGATGAAGAAGCTGCAAGAGAACTTGAGTTTCTTGGTAGAATCAAGCATCCTAATCTAGTTCCTTTAACCGGTTATTGTGTAGCTGGTGATCAAAGGATCGCTATATATGATTACATGGAGAATGGAAACTTGCAAAATCTTCTTTATGATTTGCCACTTGGTGTTCAAAGCACAGATGATTGGAGCACAGATACTTGGGAAGAAGCTGATAATGGAATTCAAAATGTTGGTTCTGAAGGATTGCTCACAACTTGGAGATTTCGACACAAAATCGCACTTGGAACTGCAAGAGCATTGGCTTTTCTGCATCATGGGTGTTCTCCTCCAATAATTCATAGAGCGGTTAAAGCCAGCAGTGTTTATTTGGATTATGATTTGGAGCCAAGGTTGTCTGATTTTGGTCTTGCCAAGATTTTTGGAAGTGGTTTGGACGAAGAGATTGCACGCGGTTCTCCCGGTTATGTTCCACCAGAGTTTTCTCAACCGGAATTTGAGTCTCCAACACCGAAATCTGATGTATATTGTTTTGGTGTTGTTCTTTTTGAGCTACTAACTGGAAAGAAGCCAGTAGGAGATGATTACACAGATGATAAAGAAGCAACAACTTTGGTAAGTTGGGTTAGAGGACTTGTAAGGAAGAGTCAAACTTCAAGAGCTATTGATCCGAAAATTCGTGATACAGGATCGGATGAACAAATGGAGGAGGCTCTTAAAGTTGGATATCTATGCACAGCTGATTTACCTTTCAAGAGACCAACCATGCAGCAGATAGTTGGACTTCTAAAGGATATTGAACCTACAACTAATTAG | 2556 | 0.376 | MGLGVFGSVLVLTFLFKHLASQQPNTDEFYVSEFLKKMGLTSSSKVYNFSSSVCSWKGVYCDSNKEHVVELNLSGIGLTGPIPDTTIGKLNKLHSLDLSNNKITALPSDFWSLTSLKSLNLSSNKISGSLTNNIGNFGSLENFDLSKNSFSDEIPEALSSLVSLKVLKLDHNMFVRSIPSGILKCQSLVSIDLSSNQLSGTLPHGFGDAFPKLRTLNLAENNIYGGVSNFSRLKSIVSLNISGNSFQGSIIDVFVLKLEALDLSRNQFQGHISQVKYNWSHLVYLDLSENQLSGEIFQSLNNSMNLKHLSLACNRFSRQKFPKIEMLLGLEYLNLSKASLVGHIPDEISHLGNLNALDLSINHLDGKIPLLKNKLLQVIDFSHNNLSGPVPSSILKNLPKMKKYNFSYNNLTLCASEIKPDIMKTSFFGSVNSCPIAANPSFFKKRRDVGHRGMKLALVLTLSLIFALAGILFLAFGCRRKNKMWEVKQGSYREEQNISGPFSFQTDSTTWVADVKQATSVPVVIFEKPLLNITFADLLSATSNFDRGTLLAEGKFGPVYRGFLPGNIHVAVKVLVVGSTLTDEEAARELEFLGRIKHPNLVPLTGYCVAGDQRIAIYDYMENGNLQNLLYDLPLGVQSTDDWSTDTWEEADNGIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRAVKASSVYLDYDLEPRLSDFGLAKIFGSGLDEEIARGSPGYVPPEFSQPEFESPTPKSDVYCFGVVLFELLTGKKPVGDDYTDDKEATTLVSWVRGLVRKSQTSRAIDPKIRDTGSDEQMEEALKVGYLCTADLPFKRPTMQQIVGLLKDIEPTTN | 851 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo1g00223 | 851 | Gene3D | Transferase(Phosphotransferase) domain 1 | 621 | 851 | - | - | |
Mepo1g00223 | 851 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 212 | 846 | - | - | |
Mepo1g00223 | 851 | SMART | LRR_typ_2 | 90 | 112 | IPR003591 | - | |
Mepo1g00223 | 851 | SMART | LRR_typ_2 | 161 | 185 | IPR003591 | - | |
Mepo1g00223 | 851 | SMART | LRR_typ_2 | 327 | 351 | IPR003591 | - | |
Mepo1g00223 | 851 | SMART | LRR_typ_2 | 113 | 137 | IPR003591 | - | |
Mepo1g00223 | 851 | PRINTS | Leucine-rich repeat signature | 93 | 106 | - | - | |
Mepo1g00223 | 851 | PRINTS | Leucine-rich repeat signature | 113 | 126 | - | - | |
Mepo1g00223 | 851 | Pfam | Protein tyrosine and serine/threonine kinase | 549 | 841 | IPR001245 | GO:0004672|GO:0006468 | |
Mepo1g00223 | 851 | ProSiteProfiles | Leucine-rich repeat profile. | 92 | 113 | IPR001611 | GO:0005515 | |
Mepo1g00223 | 851 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 506 | 620 | - | - | |
Mepo1g00223 | 851 | FunFam | Calmodulin-binding receptor kinase CaMRLK | 256 | 370 | - | - | |
Mepo1g00223 | 851 | Gene3D | Ribonuclease Inhibitor | 31 | 178 | IPR032675 | - | |
Mepo1g00223 | 851 | Gene3D | Ribonuclease Inhibitor | 256 | 322 | IPR032675 | - | |
Mepo1g00223 | 851 | FunFam | Nuclear pore complex protein NUP107 | 28 | 180 | - | - | |
Mepo1g00223 | 851 | Pfam | Leucine rich repeat | 187 | 245 | IPR001611 | GO:0005515 | |
Mepo1g00223 | 851 | Pfam | Leucine rich repeat | 69 | 126 | IPR001611 | GO:0005515 | |
Mepo1g00223 | 851 | Gene3D | Phosphorylase Kinase; domain 1 | 505 | 620 | - | - | |
Mepo1g00223 | 851 | Gene3D | Ribonuclease Inhibitor | 323 | 435 | IPR032675 | - | |
Mepo1g00223 | 851 | Gene3D | Ribonuclease Inhibitor | 179 | 255 | IPR032675 | - | |
Mepo1g00223 | 851 | SUPERFAMILY | Protein kinase-like (PK-like) | 522 | 843 | IPR011009 | - | |
Mepo1g00223 | 851 | SUPERFAMILY | L domain-like | 42 | 415 | - | - | |
Mepo1g00223 | 851 | Pfam | Leucine Rich repeat | 280 | 295 | IPR001611 | GO:0005515 | |
Mepo1g00223 | 851 | ProSiteProfiles | Protein kinase domain profile. | 545 | 850 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo1g00223 | Mepo-Chr1 | 2021034 | 2023904 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo1g00223 | 78 | 846 | Receptor kinase-like Gene Family | AT5G07280 | 32.617 | 1.15e-110 | 364 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VII-2 | Mepo1g00223 | PK_Tyr_Ser-Thr | 1.2e-29 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo1g00223 | - | - | gmx:100797738 | 1378.23 |