Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00223 ATGGGTTTAGGAGTATTTGGATCTGTTTTGGTTTTGACATTTTTGTTCAAGCATTTAGCTTCACAGCAACCAAACACTGATGAATTCTATGTCTCTGAGTTTTTGAAGAAAATGGGTTTAACATCATCCTCCAAAGTTTACAACTTTTCATCTTCTGTTTGTTCTTGGAAAGGTGTTTATTGTGATTCCAATAAGGAACATGTTGTTGAATTGAACCTTTCTGGTATTGGTCTTACTGGTCCTATTCCTGATACAACCATAGGCAAACTCAACAAACTTCACTCTCTGGATCTTAGCAACAACAAAATCACTGCTTTGCCTTCAGATTTTTGGAGTTTAACCTCTCTCAAAAGCCTTAATCTTTCTTCCAATAAGATTTCAGGTTCATTGACTAACAACATTGGAAACTTTGGTTCACTTGAAAACTTTGACTTGTCAAAAAACAGTTTCTCTGATGAAATTCCTGAAGCTTTGAGTTCCCTTGTGAGTTTGAAGGTTCTCAAACTTGACCACAATATGTTTGTTAGAAGCATTCCTTCAGGGATTCTTAAGTGTCAGTCTCTAGTTTCAATTGATCTTTCATCTAATCAGCTGAGTGGAACACTTCCACATGGTTTTGGTGATGCTTTTCCTAAGCTTAGGACTTTGAACCTTGCTGAGAATAATATCTATGGTGGTGTGTCAAATTTTTCAAGGTTGAAGTCTATTGTGAGTCTCAACATTTCAGGAAATTCATTTCAAGGTTCTATTATAGATGTCTTTGTGCTAAAGTTGGAGGCTTTGGACCTTAGCAGAAACCAATTTCAAGGTCACATTTCTCAGGTAAAGTACAACTGGTCTCATTTAGTTTATCTGGATTTGTCTGAGAATCAGCTTAGTGGAGAAATTTTCCAAAGCTTGAACAATTCAATGAATTTAAAGCACCTTAGTCTTGCATGCAATAGATTTTCAAGACAGAAATTCCCAAAGATTGAAATGCTCCTAGGATTGGAATATCTTAATTTGTCTAAAGCTAGTCTTGTTGGTCACATTCCTGATGAAATCTCACATCTTGGTAATTTGAATGCACTTGATCTTTCTATAAATCATCTTGATGGAAAAATTCCCTTACTGAAGAATAAACTTCTTCAAGTTATTGACTTTTCACATAACAATTTGAGTGGACCAGTCCCTTCATCTATCTTGAAGAATCTCCCAAAGATGAAGAAATATAACTTCTCTTATAATAACTTAACCCTTTGTGCCTCAGAAATCAAGCCTGATATCATGAAAACATCGTTCTTTGGATCAGTTAACAGCTGCCCAATAGCTGCAAATCCGAGTTTTTTCAAAAAAAGAAGAGACGTCGGCCACAGGGGAATGAAGCTAGCTCTTGTATTAACCCTCTCATTGATATTTGCGCTTGCTGGTATTCTGTTTCTAGCCTTTGGTTGCAGAAGGAAAAATAAAATGTGGGAAGTGAAACAAGGTTCTTACAGAGAAGAACAGAATATCTCAGGTCCATTTTCTTTCCAAACTGATTCAACAACTTGGGTAGCTGATGTCAAACAAGCAACATCAGTTCCGGTAGTAATCTTTGAGAAGCCCTTGTTGAATATTACATTTGCAGATCTCTTATCTGCAACTTCAAATTTTGATAGAGGTACCCTTTTGGCTGAAGGAAAATTTGGACCTGTTTATCGAGGCTTTCTACCTGGAAATATTCATGTAGCAGTTAAAGTGTTGGTTGTGGGTTCTACATTGACAGATGAAGAAGCTGCAAGAGAACTTGAGTTTCTTGGTAGAATCAAGCATCCTAATCTAGTTCCTTTAACCGGTTATTGTGTAGCTGGTGATCAAAGGATCGCTATATATGATTACATGGAGAATGGAAACTTGCAAAATCTTCTTTATGATTTGCCACTTGGTGTTCAAAGCACAGATGATTGGAGCACAGATACTTGGGAAGAAGCTGATAATGGAATTCAAAATGTTGGTTCTGAAGGATTGCTCACAACTTGGAGATTTCGACACAAAATCGCACTTGGAACTGCAAGAGCATTGGCTTTTCTGCATCATGGGTGTTCTCCTCCAATAATTCATAGAGCGGTTAAAGCCAGCAGTGTTTATTTGGATTATGATTTGGAGCCAAGGTTGTCTGATTTTGGTCTTGCCAAGATTTTTGGAAGTGGTTTGGACGAAGAGATTGCACGCGGTTCTCCCGGTTATGTTCCACCAGAGTTTTCTCAACCGGAATTTGAGTCTCCAACACCGAAATCTGATGTATATTGTTTTGGTGTTGTTCTTTTTGAGCTACTAACTGGAAAGAAGCCAGTAGGAGATGATTACACAGATGATAAAGAAGCAACAACTTTGGTAAGTTGGGTTAGAGGACTTGTAAGGAAGAGTCAAACTTCAAGAGCTATTGATCCGAAAATTCGTGATACAGGATCGGATGAACAAATGGAGGAGGCTCTTAAAGTTGGATATCTATGCACAGCTGATTTACCTTTCAAGAGACCAACCATGCAGCAGATAGTTGGACTTCTAAAGGATATTGAACCTACAACTAATTAG 2556 0.376 MGLGVFGSVLVLTFLFKHLASQQPNTDEFYVSEFLKKMGLTSSSKVYNFSSSVCSWKGVYCDSNKEHVVELNLSGIGLTGPIPDTTIGKLNKLHSLDLSNNKITALPSDFWSLTSLKSLNLSSNKISGSLTNNIGNFGSLENFDLSKNSFSDEIPEALSSLVSLKVLKLDHNMFVRSIPSGILKCQSLVSIDLSSNQLSGTLPHGFGDAFPKLRTLNLAENNIYGGVSNFSRLKSIVSLNISGNSFQGSIIDVFVLKLEALDLSRNQFQGHISQVKYNWSHLVYLDLSENQLSGEIFQSLNNSMNLKHLSLACNRFSRQKFPKIEMLLGLEYLNLSKASLVGHIPDEISHLGNLNALDLSINHLDGKIPLLKNKLLQVIDFSHNNLSGPVPSSILKNLPKMKKYNFSYNNLTLCASEIKPDIMKTSFFGSVNSCPIAANPSFFKKRRDVGHRGMKLALVLTLSLIFALAGILFLAFGCRRKNKMWEVKQGSYREEQNISGPFSFQTDSTTWVADVKQATSVPVVIFEKPLLNITFADLLSATSNFDRGTLLAEGKFGPVYRGFLPGNIHVAVKVLVVGSTLTDEEAARELEFLGRIKHPNLVPLTGYCVAGDQRIAIYDYMENGNLQNLLYDLPLGVQSTDDWSTDTWEEADNGIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRAVKASSVYLDYDLEPRLSDFGLAKIFGSGLDEEIARGSPGYVPPEFSQPEFESPTPKSDVYCFGVVLFELLTGKKPVGDDYTDDKEATTLVSWVRGLVRKSQTSRAIDPKIRDTGSDEQMEEALKVGYLCTADLPFKRPTMQQIVGLLKDIEPTTN 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00223 851 Gene3D Transferase(Phosphotransferase) domain 1 621 851 - -
Mepo1g00223 851 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 212 846 - -
Mepo1g00223 851 SMART LRR_typ_2 90 112 IPR003591 -
Mepo1g00223 851 SMART LRR_typ_2 161 185 IPR003591 -
Mepo1g00223 851 SMART LRR_typ_2 327 351 IPR003591 -
Mepo1g00223 851 SMART LRR_typ_2 113 137 IPR003591 -
Mepo1g00223 851 PRINTS Leucine-rich repeat signature 93 106 - -
Mepo1g00223 851 PRINTS Leucine-rich repeat signature 113 126 - -
Mepo1g00223 851 Pfam Protein tyrosine and serine/threonine kinase 549 841 IPR001245 GO:0004672|GO:0006468
Mepo1g00223 851 ProSiteProfiles Leucine-rich repeat profile. 92 113 IPR001611 GO:0005515
Mepo1g00223 851 FunFam Putative LRR receptor-like serine/threonine-protein kinase 506 620 - -
Mepo1g00223 851 FunFam Calmodulin-binding receptor kinase CaMRLK 256 370 - -
Mepo1g00223 851 Gene3D Ribonuclease Inhibitor 31 178 IPR032675 -
Mepo1g00223 851 Gene3D Ribonuclease Inhibitor 256 322 IPR032675 -
Mepo1g00223 851 FunFam Nuclear pore complex protein NUP107 28 180 - -
Mepo1g00223 851 Pfam Leucine rich repeat 187 245 IPR001611 GO:0005515
Mepo1g00223 851 Pfam Leucine rich repeat 69 126 IPR001611 GO:0005515
Mepo1g00223 851 Gene3D Phosphorylase Kinase; domain 1 505 620 - -
Mepo1g00223 851 Gene3D Ribonuclease Inhibitor 323 435 IPR032675 -
Mepo1g00223 851 Gene3D Ribonuclease Inhibitor 179 255 IPR032675 -
Mepo1g00223 851 SUPERFAMILY Protein kinase-like (PK-like) 522 843 IPR011009 -
Mepo1g00223 851 SUPERFAMILY L domain-like 42 415 - -
Mepo1g00223 851 Pfam Leucine Rich repeat 280 295 IPR001611 GO:0005515
Mepo1g00223 851 ProSiteProfiles Protein kinase domain profile. 545 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00223 Mepo-Chr1 2021034 2023904 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00223 78 846 Receptor kinase-like Gene Family AT5G07280 32.617 1.15e-110 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Mepo1g00223 PK_Tyr_Ser-Thr 1.2e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00223 - - gmx:100797738 1378.23