Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00217 ATGGCTATGCTCCGCAAGTTGTTCTATCGTAAGCCTCCTGATGGTCTCCTCGAGATCTGCGACAGAGTTTACGTTTTTGATTGCTGTTTCACAACGGAAGCTTGGAATGAAGAGAAGTATAAAGTGTATATGGATGGTATAGTTGGTCAGCTTAGAGAGAATGTGCCTGATGCTTCTATTTTGGTTTTCAATTTTCGCGAGGAAGAGACCAAGAGTTTGATGGCAAATATAATATCTGAGTATGACATTACTATAATGGATTATCCTAGGCATTATGAAGGTTGTCCTGTGCTTAAAATGGAGCTCATTCACCACTTTTTAAGGTCTAGTGAAAGTTGGCTATCACTTGGTCAACACAATGTGTTGTTGATGCATTGTGAACGTGGTGGTTGGCCCGTTATGGCTTTCATGTTGGCTGCATTGTTGATTTATCGGAAGGTTTATAGTGGCGAGCATAGGACTTTGGATATGATTTATCGGCAGTCCCCACACGAGCTTTTACATTTATTGACGCCGTTGAATCCAATTCCTTCCCAACTGAGGTATCTGCAGTATGTTTCTAGAAGGAATGTGGCCTTAGATTGGCCTCCCCTCGACAGGGCACTCATGTTGGACTGTATTATACTTAGATTCTTCCCAAACTTTGACGGGGAAGGTGGTTGTCATCCCTTGTTTAGAATTTATGGACAAGATCCTTTTAGTGCAGATAAAAGTCCTAAAATGTTGTACTCAATGCCAAAGAGAAGCAAAAATGTTCGGGCTTACAAGCAGGGAGAGTGCGAACTAATTAAAATTGATATCAATTGCCATATTCAAGGTGATGTTGTGATCGAGGGTATTAACTTGAATGATGATATGGAGCATGAAATTATGATGCTTCGAGTTATGTTCAACACAGCTTTTGTTAGATCCAATATTCTGATGCTTAATCGCGATGAAATTGATGTTCTATGGGATGCTAAAGATCACTTTCCAAAAGATTTCAGAGCTGAGATCCTTTTCTCAGAGATAGATGCTGCTGCAGCAGTTATTGCAGATAATACATCATTCTTTGAGGAGAAAGATGGACTGCCAATTGAAGCATTTGCCAAGGTTCAAGAGATCTTTAGCCATGTGGACTGGATGAACCCAAAGGCAGATGCTGCACTAAACGTGCTCCAACAAATAAGCACTTCTGCTATCATGAATGACAAGCTGGATAAAGTTTCTGACCAGCATGTGGAAACTGCCACTTCATTGGGCGAAACAGGTCCTAAAACGCCTCAAAGGAATTCATATGAAGCATTACGGTCTTTATCCTCAACTAAGAGAACCCTAAATAATGATATGAGCGGAAAAGAGGAAAAGACAAACAAAGTAGATGCTATTCCACAGAGGGCTAATACATCAGACATCATCAGTCAGGAGAAAATTTGCTCATCTGAAAAAAGTTTGGAATCCAGTAAATGTCCAACAGGATCAACAAATTTTGACATAAAACCACAGGAATCTAATCCTGCTTCATCTGGTTCTGCGGATTCTTCTCTTTCCCCTGGAACACCTCCTCCGCGGCCTCCCTTGACTACTCGTTCTAAAGAAGTTCATGATTCTCCTCCCCACACAGCATTGCCTCCACATCATATTTTTCCTTCGCAATCAGGACCTCAATCACAAGACAGGAGTTACTCACCTATTTCTAGCTCTACACCTGGGACCTATCATTCCCTTGCACCTGATTCTTCAATTGAGCCATCCCCTCCACTTTCTTCGAGAACACCTTTGAATGACATTCCTCCAGTCAAAACAAGACCCAAGTCTCCCTCTTCGCAGCCTCCAACTCCACCTCCTCCTCCTACCCCTCCACTAAAAGATCAGAAAGTAGTTAGGGCTGGACCTCTCTCCCCACCCCCACCACCTCCTTCTCCAAAGAAGGAACTACATGTTAAAGTTGGACCTCCTCCTTCTCCTCCTGTCCCATCTCATATGAATGAAAAACCACATGTTAGAGATGGACTTTCTCCTCCCCCTCCCCCTCTTCCTCCATCACCTCCTCTAAAAGCGGAGCAACCTACTAGGTTTCAGCCCCCGCCACCTCCACCACCACCTCGTCTTTCAATGGAAGCTGCAAGTCCTATTACAGCACCGCCTGCACCGCCTCCACCTCCATCTGCAACACTTTCCTCTGGTAACCCTAATGCTTCACTGCAAAAGTCTTCACCTGCTCCACCACCTCCAATTCCTTTTGGTAAAGGTCAAAAACCAGGCAGTGCTTTTCCAATGTCCCTTTCTGTGGGAGTTGATGGAAATAAGGTCTCATGCACAACAGGACCTCAATCTAGTTCACTAACAGGCTCAAAGGGACGAGTTCTATCACGTGCAATTGGCTCAAAAAATGACTCCAAAAAGTTGAAGCCATTGCATTGGATGAAGCTATCTAGAGCAGTGCAAGGAAGTTTGTGGGATGAGACACAAAAATCTGGCGAAGCTTCCAAAGCCCCAGAGATTGATATGTCGGAGCTCGAGAGTCTCTTCTCGGCAGCAGCCCCTAGTTCAGGCCCTGCCAAGAAGTCAAATGTCCAAAGCTCAGTGAAGCCTAAATCTGAGAAAGTGCAACTGATTGATCATAGGCGAGCATATAATTGTGAAATCATGCTTTCAAAAGTGAAGGTGCCATTGCATGATTTAATGAGCTCAGTGCTAGCACTAGAAGAGTCGACGCTAGACACTGATACTGTCGAGAACCTCATAAAGTTCTGTCCTACAAAAGAGGAGATGGAGATAATTAAGAATTATAACGGGGAAAAGGAGAAATTAGGGAGATGTGAACAGTTCTTCATGGAGTTGATGAAAGTTCCACGGGTAGAAGCTAAGCTCAGGGTCTTTTCATTCAGGATTCAGTTCTATTCTCAGGTTTCTGATCTCAAAAATAGCCTAAAAGTTGTGAATTCTGCTGCAGAAGAGATCAGGAATTCTGTCAAATTGAAGAGAATTATGCAAACAATACTTACTCTAGGAAATGCTTTGAATCAAGGAACTGCCAGGGGTTCTGCTATTGGATTCAGATTAGATAGCCTTCTTAAACTCACTGAGACACGGGCACGGAACAACAAAATGACTCTCATGCATTATCTTTGTAAGGTGTTAGATGACAAGTTACCAGAAGTCTTAGACTTCTCTAAGGATCTTGCTAACCTAGAGCCAGCAGCAAAGATCCAATTGAAGTTTCTTGCAGAGGAGATGCAAGCTATAAACAAAGGGTTAGAGAAAGTCGTCCAGGAATTATCCACTTCTGAAAATGATGGTCCTATATCAGAAACGTTCCGCAAGAAATTGAAAGGGTTCCTCTGTTCTGCTGAAGCTGAAGTCCGAACATTGGCTTCACTATATTCTGGTGTGGGCAAGAACGTGGATGCGTTGATTCTTTATTTTGGGGAAGATCCATCTCGCTGTCAATTTGAGCAAGTTGTCACAACTTTGCTGAACTTTACTCGTATGTTCAACAAAGCCCATGAAGAAAATCGCAAGCAGCTAGAGCTTGAAATGAAGAAAACAGCAGAAAGTGATAAAAAGAAATGTGAATCAGAAAGGATATTACCTACAGCGATCCGGACTGGCAATGTCAAATAA 3606 0.4293 MAMLRKLFYRKPPDGLLEICDRVYVFDCCFTTEAWNEEKYKVYMDGIVGQLRENVPDASILVFNFREEETKSLMANIISEYDITIMDYPRHYEGCPVLKMELIHHFLRSSESWLSLGQHNVLLMHCERGGWPVMAFMLAALLIYRKVYSGEHRTLDMIYRQSPHELLHLLTPLNPIPSQLRYLQYVSRRNVALDWPPLDRALMLDCIILRFFPNFDGEGGCHPLFRIYGQDPFSADKSPKMLYSMPKRSKNVRAYKQGECELIKIDINCHIQGDVVIEGINLNDDMEHEIMMLRVMFNTAFVRSNILMLNRDEIDVLWDAKDHFPKDFRAEILFSEIDAAAAVIADNTSFFEEKDGLPIEAFAKVQEIFSHVDWMNPKADAALNVLQQISTSAIMNDKLDKVSDQHVETATSLGETGPKTPQRNSYEALRSLSSTKRTLNNDMSGKEEKTNKVDAIPQRANTSDIISQEKICSSEKSLESSKCPTGSTNFDIKPQESNPASSGSADSSLSPGTPPPRPPLTTRSKEVHDSPPHTALPPHHIFPSQSGPQSQDRSYSPISSSTPGTYHSLAPDSSIEPSPPLSSRTPLNDIPPVKTRPKSPSSQPPTPPPPPTPPLKDQKVVRAGPLSPPPPPPSPKKELHVKVGPPPSPPVPSHMNEKPHVRDGLSPPPPPLPPSPPLKAEQPTRFQPPPPPPPPRLSMEAASPITAPPAPPPPPSATLSSGNPNASLQKSSPAPPPPIPFGKGQKPGSAFPMSLSVGVDGNKVSCTTGPQSSSLTGSKGRVLSRAIGSKNDSKKLKPLHWMKLSRAVQGSLWDETQKSGEASKAPEIDMSELESLFSAAAPSSGPAKKSNVQSSVKPKSEKVQLIDHRRAYNCEIMLSKVKVPLHDLMSSVLALEESTLDTDTVENLIKFCPTKEEMEIIKNYNGEKEKLGRCEQFFMELMKVPRVEAKLRVFSFRIQFYSQVSDLKNSLKVVNSAAEEIRNSVKLKRIMQTILTLGNALNQGTARGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKVLDDKLPEVLDFSKDLANLEPAAKIQLKFLAEEMQAINKGLEKVVQELSTSENDGPISETFRKKLKGFLCSAEAEVRTLASLYSGVGKNVDALILYFGEDPSRCQFEQVVTTLLNFTRMFNKAHEENRKQLELEMKKTAESDKKKCESERILPTAIRTGNVK 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00217 1201 MobiDBLite consensus disorder prediction 543 583 - -
Mepo1g00217 1201 Gene3D - 199 339 - -
Mepo1g00217 1201 Gene3D Protein tyrosine phosphatase superfamily 15 198 IPR029021 -
Mepo1g00217 1201 MobiDBLite consensus disorder prediction 455 510 - -
Mepo1g00217 1201 SMART it6_source 786 1201 IPR015425 -
Mepo1g00217 1201 MobiDBLite consensus disorder prediction 406 440 - -
Mepo1g00217 1201 PANTHER FORMIN-J 1 653 - -
Mepo1g00217 1201 MobiDBLite consensus disorder prediction 624 654 - -
Mepo1g00217 1201 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Mepo1g00217 1201 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 337 IPR035892 -
Mepo1g00217 1201 ProSiteProfiles Formin homology-2 (FH2) domain profile. 786 1185 IPR015425 -
Mepo1g00217 1201 ProSiteProfiles C2 tensin-type domain profile. 199 337 IPR014020 -
Mepo1g00217 1201 Coils Coil 1066 1086 - -
Mepo1g00217 1201 Gene3D Formin, FH2 domain 788 1170 IPR042201 -
Mepo1g00217 1201 SUPERFAMILY Formin homology 2 domain (FH2 domain) 799 1176 - -
Mepo1g00217 1201 MobiDBLite consensus disorder prediction 405 781 - -
Mepo1g00217 1201 MobiDBLite consensus disorder prediction 663 719 - -
Mepo1g00217 1201 MobiDBLite consensus disorder prediction 760 780 - -
Mepo1g00217 1201 MobiDBLite consensus disorder prediction 839 860 - -
Mepo1g00217 1201 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Mepo1g00217 1201 MobiDBLite consensus disorder prediction 844 860 - -
Mepo1g00217 1201 Pfam Formin Homology 2 Domain 791 1159 IPR015425 -
Mepo1g00217 1201 MobiDBLite consensus disorder prediction 597 616 - -
Mepo1g00217 1201 Coils Coil 1160 1180 - -
Mepo1g00217 1201 SMART PTEN_C2_2 197 336 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00217 Mepo-Chr1 1949418 1960247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00217 768 1183 Protein tyrosine phosphatase (PTP) family AT5G58160 73.141 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00217 - - aprc:113848377 1749.18