Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00212 ATGCAATCTCTTAACTCTCTCTTCAACTCTTCTTCTTCTGAAATTCCCATTCCTCTCCAAAATCAGATCCAAATTAACAACAACAACAACAATAACAACGACGCATTCAACCACCATCACGACGATTTTCTCAAACAAATCCTCTCCACTAATCTTCCTCCTTCCTGGAACACTCTCGACCCTAACAACAAACCCTTATTATGGGACCCCAATTCCGATGAAAATGTCACTTTCCCTAATTACGATGAACAACACAACAATCTTGCCTCCAAGTTTCGTAACCACCAGATCACTGACAAAACGGCCGCCGCTCTCATGCTTCTCACCGCCGATTCTGGAGGTCTTCTCCACATGCCTGCTGACTTTGACTCCTCCCAAAACGACGTCGTCAACACCTCCTCCCTTTTACAGGCTGCTGGTGACGCTTCCGTTCAAGCTCTCTTCAACGGTTTCTCTGGATCTCTCCATGGTGTCGCTCAACCTCACCATTTTCAACCTCCTCAGGGGCAGAGTTTTGGAAGTGGTTCCGTGAGTGCAACGAACCAAGCTCCGGCAAGTGGAGCTCCGGCTCAGCCGAGGCAGAAGGTTAGGGCAAGGAGAGGTCAAGCCACCGACCCACACAGCATCGCCGAAAGGTTACGGAGGGAAAGAATTGCTGAGAGGATGAAAGCTTTGCAGGAACTTGTTCCTAATGCAAACAAGACAGACAAGGCTTCCATGCTGGATGAGATCATCGATTATGTGAAGTTCCTACAAGTCCAAGTCAAAGTTTTGAGCATGAGCAGATTAGGTGGAGCAGGGGCTGTAGCTCCTCTTGTGGCTGATATGTCCTCCGAGGGTGTCAGTGACTGCGTCCAAACAAACGGCAACGGAGGGGTCCACCCACGAAACCCTAAAACGGCGTCGTCCTCCAACGAAAGCCTCACCATGACAGAGCATCAAGTGGCAAAGCTAATGGAAGAAGACATGGGATCTGCCATGCAATACTTACAAGGCAAAGGTCTTTGCCTCATGCCTATTTCTCTTGCTACTGCAATCTCTACTGCCACGTGTCACACCAGGAACCCTTTGATCAATGCTGCTAATAATAATAATAATAATAATATCAACGGTAGTTCTAACCCTATCACCGCATCTAACGGTGATGGGCCATCCTCTCCCGGAATGTCCGTTAACAGCATCGTCAAAGATGCTAACTCCGCTTCTAAGTCGTAG 1215 0.4823 MQSLNSLFNSSSSEIPIPLQNQIQINNNNNNNNDAFNHHHDDFLKQILSTNLPPSWNTLDPNNKPLLWDPNSDENVTFPNYDEQHNNLASKFRNHQITDKTAAALMLLTADSGGLLHMPADFDSSQNDVVNTSSLLQAAGDASVQALFNGFSGSLHGVAQPHHFQPPQGQSFGSGSVSATNQAPASGAPAQPRQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQVKVLSMSRLGGAGAVAPLVADMSSEGVSDCVQTNGNGGVHPRNPKTASSSNESLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHTRNPLINAANNNNNNNINGSSNPITASNGDGPSSPGMSVNSIVKDANSASKS 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00212 404 Gene3D - 197 259 IPR036638 GO:0046983
Mepo1g00212 404 SMART finulus 208 257 IPR011598 GO:0046983
Mepo1g00212 404 MobiDBLite consensus disorder prediction 288 308 - -
Mepo1g00212 404 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 200 261 IPR036638 GO:0046983
Mepo1g00212 404 MobiDBLite consensus disorder prediction 364 404 - -
Mepo1g00212 404 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 202 251 IPR011598 GO:0046983
Mepo1g00212 404 MobiDBLite consensus disorder prediction 158 208 - -
Mepo1g00212 404 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 58 346 - -
Mepo1g00212 404 MobiDBLite consensus disorder prediction 164 188 - -
Mepo1g00212 404 FunFam Transcription factor bHLH66 199 264 - -
Mepo1g00212 404 Pfam Helix-loop-helix DNA-binding domain 207 252 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00212 Mepo-Chr1 1871353 1874949 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00212 188 361 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 75.429 1.62e-88 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo1g00212 HLH 1.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00212 - - psat:127138414 571.237