Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00205 ATGTCTATTAGAAAACCCCCACCCCCTCGTCTCCTCCTTAACAATGTCTCTTGCATGAGAAATGCCTCGCAAGTTCTGTCTAATGTGAATGTCTCTCTTCATGATGGAGGGGCACTTGTGCTAACAGGTGCAAATGGCTCGGGAAAGTCCACTTTCATGCGCATGTTAGCTGGGTTTTCTCGTCCTTCTGCAGGAGAAATCCTTTGGAATGGCCATGACATTCAAAAATCTACAATCTTCCATCAGTATAAGCTTCAGCTTAACTGGGTCTGCCTCAAGCATGGAATTAATGAGAAGTCTACTGTTCTGGACAATGTTGAGTTGTTTGAACTTCTTGATTACAAGCGAGGGAAAGCTAAGTCTGCACTTGAGTTGATGGGACTGGGAAGATTGGCTAAGGAAAAGCCAAAGATGCTTTCAATGGGCCAGCGGAAAAGATTGCAACTTGCCAGATTGCTCGCAATTGATCGCCCCATATGGCTGCTAGACGAGCCTTCAGTTGCATTAGACGATGAAGGTGTAAAGTTACTCGAGTACATTATTGCAGAACACAGGAAACAGGGAGGAATTGTGATTGTGGCAACTCATTTACCCATTGAGATAGAAGATTCCATGCTCTTGAGGTTGCCACCTAGGTTTCCAAGGAGGATGACACTTATAGATATGCTTGACCGGGCGGATATTAGTTAA 690 0.4464 MSIRKPPPPRLLLNNVSCMRNASQVLSNVNVSLHDGGALVLTGANGSGKSTFMRMLAGFSRPSAGEILWNGHDIQKSTIFHQYKLQLNWVCLKHGINEKSTVLDNVELFELLDYKRGKAKSALELMGLGRLAKEKPKMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVKLLEYIIAEHRKQGGIVIVATHLPIEIEDSMLLRLPPRFPRRMTLIDMLDRADIS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00205 229 NCBIfam heme ABC exporter ATP-binding protein CcmA 13 208 IPR005895 GO:0017004|GO:0022857
Mepo1g00205 229 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 228 IPR003439 GO:0005524
Mepo1g00205 229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 202 IPR027417 -
Mepo1g00205 229 Gene3D - 5 207 IPR027417 -
Mepo1g00205 229 SMART AAA_5 35 223 IPR003593 GO:0016887
Mepo1g00205 229 Pfam ABC transporter 26 166 IPR003439 GO:0005524
Mepo1g00205 229 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 6 223 IPR005895 GO:0017004|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00205 Mepo-Chr1 1796307 1798946 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00205 24 196 Calmodulin-binding Proteins AT2G36910 27.225 7.38e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00205 - - gmx:100796586 376.326