Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00198 ATGATGGCTGTGGAGAATCCTTTGGAGGTTGAAGATGTCTTCAGAGAAGATTTTCCGGTGGGAATGCGTGTTCTGGCTGTTGACGACGATCAAACTTGTCTCAAACTGTTGGAGAAGTTTCTTCTCATGTGCAAGTATAATGTTACTACAACTACGAAGCCTGTGGAAGCGCTAGAATTGTTGAGGGAAAAGAGAGATATGTTTGACCTTGTAATTAGTGATGTTAGCATGCCAGAAATGGATGGATTCAAGCTCCTTGAGCAAGTTGGACTTGAAATGGACCTACCCTTCATCATGTTGTCAGGAAATGATGATAGAGAGAGGGTGATGAAAGGTGTGATGAAAGGCGCTTGCGACTATCTAGTGAAACCAATCCGATTGGAAGAACTTAAGAACATATGGCAACATGTAGTGAGAAAGAAGATTGAAAGCAAGGATCGGAATAAAGAAATCATTACTGATGGGATATGTAGTCAAGACACCTCATCTGAAAATATTGCCAACAAGAATAAAACCCGTAGACAAAAAATAAAGGAACAAAGTGAGGATGAAGAAGAAGAAGAAGCAGAAGAAGATAATGGTGGAGACAATGATGAGGAACGCTCGACTCGGAAGAAGCCTCGTTTAGTTTGGGATGATGAATTGCATAAAAAATTTGTATCTATAGTTAGTCAACTCGGCCTTGATAAGGCATATCCTAAGAAAATATGTGACTTGATGAATGTTGAAGGGCTTACAAGGGAAAATGTAGCTAGCCATTTGCAGAAATACAAACTTAGTCTCAAAAGGCCATCTAAACAGGCTAGAGTAGATGCTGCATTAGATCCTCACCTACAAAAGAATTCAGTAGCCGGATATGGAGATTTTTGTACCTTACCTGGATCAAGAAGAATCTTAAGCAGCACATTGCCAACATATGCATCTAGTAACATGAAAAGCCCAACTGATTTTTCTTTGACACGCGTCATTGATGTTCCTTTAGAGGAAACGATGCAATGTCAAGATGGATTACTTGGGAATGTTGTAACGGCTTCATGTTACACGCAGCAGCAAAACGTGGATTCTTCCTTCAACAATACCTTGGATTTTCTTGCTTCTTCTAATTCAGGCACTAGTTCCATGGTCCATAATGTACCCCAAGCTAATAGTCCATTAATCACTCAGATGCCTCAAGTTGAGAAAACAGATGATAGAACTATGGATTCAAATGGTGATTGCTTTTTTGAGCAATTGCTTGATGTAGATGGATTCGTTCAGAATAGTTGTTTGCCTTGGATGACACAATAA 1287 0.3963 MMAVENPLEVEDVFREDFPVGMRVLAVDDDQTCLKLLEKFLLMCKYNVTTTTKPVEALELLREKRDMFDLVISDVSMPEMDGFKLLEQVGLEMDLPFIMLSGNDDRERVMKGVMKGACDYLVKPIRLEELKNIWQHVVRKKIESKDRNKEIITDGICSQDTSSENIANKNKTRRQKIKEQSEDEEEEEAEEDNGGDNDEERSTRKKPRLVWDDELHKKFVSIVSQLGLDKAYPKKICDLMNVEGLTRENVASHLQKYKLSLKRPSKQARVDAALDPHLQKNSVAGYGDFCTLPGSRRILSSTLPTYASSNMKSPTDFSLTRVIDVPLEETMQCQDGLLGNVVTASCYTQQQNVDSSFNNTLDFLASSNSGTSSMVHNVPQANSPLITQMPQVEKTDDRTMDSNGDCFFEQLLDVDGFVQNSCLPWMTQ 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00198 428 MobiDBLite consensus disorder prediction 182 196 - -
Mepo1g00198 428 SUPERFAMILY CheY-like 21 145 IPR011006 -
Mepo1g00198 428 FunFam Two-component response regulator 202 265 - -
Mepo1g00198 428 CDD REC_typeB_ARR-like 24 138 - -
Mepo1g00198 428 Pfam Myb-like DNA-binding domain 210 258 IPR001005 -
Mepo1g00198 428 Pfam Response regulator receiver domain 24 132 IPR001789 GO:0000160
Mepo1g00198 428 Gene3D - 21 153 - -
Mepo1g00198 428 Coils Coil 167 187 - -
Mepo1g00198 428 Gene3D - 202 263 - -
Mepo1g00198 428 PIRSF RR_ARR_type-B 1 421 IPR017053 GO:0003677|GO:0003700|GO:0009736
Mepo1g00198 428 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 203 262 IPR017930 -
Mepo1g00198 428 ProSiteProfiles Response regulatory domain profile. 23 138 IPR001789 GO:0000160
Mepo1g00198 428 SUPERFAMILY Homeodomain-like 203 263 IPR009057 -
Mepo1g00198 428 PANTHER TWO-COMPONENT RESPONSE REGULATOR 22 331 IPR045279 GO:0009736
Mepo1g00198 428 SMART REC_2 22 134 IPR001789 GO:0000160
Mepo1g00198 428 MobiDBLite consensus disorder prediction 162 205 - -
Mepo1g00198 428 MobiDBLite consensus disorder prediction 167 181 - -
Mepo1g00198 428 NCBIfam myb-like DNA-binding domain, SHAQKYF class 206 259 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00198 Mepo-Chr1 1759245 1762776 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00198 2 274 Response Regulator Gene Family AT2G25180 56.044 4.89e-90 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mepo1g00198 Response_reg 1.2e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00198 - K14491 tpra:123909856 414.846