Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00197 ATGATGGCTGTGGAGGATCGTTTGGTGGGTGAAGATGTTACCGAAGAAGGTTTTCCGGTCGGTATGCGTGTTCTGGCTGTTGACGACGATCAGACTAGTCTCAAAGTGCTGGAGAAGCATCTTCTCACATGCAAGTACAACGTTACTACAACTACAAACTCAGTGGAAGCGCTTGAATTGTTGAGGGAAAAGAGAAGTATGTTTGACCTTATAATTAGTGATGTAAACATGCCAGAAATGGATGGTTTCAAGCTCCTTGAGCAAGTTGGACTTGAAATGGACCTGCCTTTCATTATGTTGTCAGGACATGATGATAGAGAAAGGGTGATGAAAGGTGTGATGAAAGGCGCTTGCGACTATCTAGTCAAACCGATCCGATTGGAGGAGCTTAAGAACATCTGGCAACATGTAGTGAGAAAGAAGATTGAAAGCAAGGATCAAAATCAAGGTGTCATGAGTGATGGGGTATGTGGTCAGGACACCTCATCTGAAAATATTGCTAACAGGAATAAAACGCATGGACGAAAAAGAAAGGAACAAAGTGAGGAGGAAGAAGCGGATACTGATGAAGAGAATGATGAGGAACACTCAACTCGGAAGAAGCCGCGTTTTGTTTGGGATAATGAGTTACACAAAAAATTTGTTTCTATAGTTAATCTACTTGGCCTTGACAAGGCTTATCCTAAAAAAATACGTGACTTGATGAATGTTGAAGGGCTTACAAGGGAAAATGTAGCTAGCCATTTGCAGAAATACAGACTTAGTCTCAAACGACCGTCTAAACAGGCTAAAGTAGATGCTGCACTGGATCCTCTCCAGCAAAAGGGTTCAGTAGGTGGATATGGAGATTTTTCTACAAATGGTTCATCTAACTTTGCTTCCAATCCTTCTCCATTGAGTGAGGATTTTAACAATGATCAAATTTCTGGCAATAGCTTAAATTTTGCCTCTCTCAGTTCTCACTTTAGGAAAAGTCCAGTTGATTTTTCTTCGACACTTGCTGTTCCTTCGGAGGAAGCGATTCAATGTCAAGATGGCTTGCTTGGGAATATTGTAAAGGCTTCATGTTATACGACGCAGCAGCAAAATGTCAGTTCTTCCTTCAACAATACCTTGGATTCTCTTGCTTCTTATCTTGAAGACACTAGTTCCATGGTACAAAGTGTACCCCAAACTAATAGTCCATTAATGACTCAGATGCCTCAAGTTGAGAAATTTTATTCAGATGCAAGAATTATGGAACCACGTGGTGATTGCTTTTTTGAGCAACTGCTTGCCCTAGATGGATTGATTGAGAATAGTTGTGTCCTTGGATTACACAATAAGTGA 1329 0.4086 MMAVEDRLVGEDVTEEGFPVGMRVLAVDDDQTSLKVLEKHLLTCKYNVTTTTNSVEALELLREKRSMFDLIISDVNMPEMDGFKLLEQVGLEMDLPFIMLSGHDDRERVMKGVMKGACDYLVKPIRLEELKNIWQHVVRKKIESKDQNQGVMSDGVCGQDTSSENIANRNKTHGRKRKEQSEEEEADTDEENDEEHSTRKKPRFVWDNELHKKFVSIVNLLGLDKAYPKKIRDLMNVEGLTRENVASHLQKYRLSLKRPSKQAKVDAALDPLQQKGSVGGYGDFSTNGSSNFASNPSPLSEDFNNDQISGNSLNFASLSSHFRKSPVDFSSTLAVPSEEAIQCQDGLLGNIVKASCYTTQQQNVSSSFNNTLDSLASYLEDTSSMVQSVPQTNSPLMTQMPQVEKFYSDARIMEPRGDCFFEQLLALDGLIENSCVLGLHNK 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00197 442 MobiDBLite consensus disorder prediction 148 168 - -
Mepo1g00197 442 MobiDBLite consensus disorder prediction 148 200 - -
Mepo1g00197 442 SUPERFAMILY CheY-like 21 145 IPR011006 -
Mepo1g00197 442 CDD REC_typeB_ARR-like 24 138 - -
Mepo1g00197 442 Pfam Response regulator receiver domain 24 132 IPR001789 GO:0000160
Mepo1g00197 442 SUPERFAMILY Homeodomain-like 198 258 IPR009057 -
Mepo1g00197 442 Pfam Myb-like DNA-binding domain 206 253 IPR001005 -
Mepo1g00197 442 FunFam Two-component response regulator 197 260 - -
Mepo1g00197 442 PIRSF RR_ARR_type-B 1 418 IPR017053 GO:0003677|GO:0003700|GO:0009736
Mepo1g00197 442 SMART REC_2 22 134 IPR001789 GO:0000160
Mepo1g00197 442 ProSiteProfiles Response regulatory domain profile. 23 138 IPR001789 GO:0000160
Mepo1g00197 442 NCBIfam myb-like DNA-binding domain, SHAQKYF class 201 254 IPR006447 GO:0003677
Mepo1g00197 442 Gene3D - 197 258 - -
Mepo1g00197 442 PANTHER TWO-COMPONENT RESPONSE REGULATOR 22 321 IPR045279 GO:0009736
Mepo1g00197 442 Gene3D - 21 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00197 Mepo-Chr1 1754212 1757214 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00197 2 269 Response Regulator Gene Family AT2G25180 58.672 6.28e-92 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mepo1g00197 Response_reg 2.1e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00197 K14491 - tpra:123909856 403.29