Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00196 ATGCATGGACGAAAAAGAAAGGAACAAAGTGAGGATGAAGAAGCAGAACAAGATAATGATGAGAAATGTTCGACTCGAAAGAAGCCTCGTTTAGTTTGGGCTAATGAGTTGCATCGAAAATTTGTTTCTGCAGTTAATCTTGTCGGCCTTGACAAGGCTTCGCCTAAGAAAATACTTGACTTGATGAATGTTGAAGGGCTTACAAGGGAAAATGTATCCAGCCATTTGCAGAGATATAGAATTGATATCAAATGGCTATCTAAAAAGGATAGAGGAGATGATGCGTTGGATCCTTACCAGCAAAAGGGTTCAGTAGACATAGCTGCTGTTCCTTTGGAGGAAACGATGCAATGTCAAGATGGCTTACTTGGGAATGTTATAAATGCTCCATGTTACACACAACATCAAAATGAAAGTTCCTCCTTCAACAATACCTTGGATTATCTTGCTTCTTCTAATGGAGACAACAGTTTCATGGTACAGAGTTTAGCCCAAACTAATAGTTCATTAATCACTCAGATGCCTGAAGTTGAGAAGTTCTATTCGGATCCAGGAATTATGGAATCAAATGGTGATTGCTTTATTGAGCAATTGCTTGATGTAGATGGACTCATTCATAATAGTTGTGTGCCTTGGATGACACAATAA 648 0.3858 MHGRKRKEQSEDEEAEQDNDEKCSTRKKPRLVWANELHRKFVSAVNLVGLDKASPKKILDLMNVEGLTRENVSSHLQRYRIDIKWLSKKDRGDDALDPYQQKGSVDIAAVPLEETMQCQDGLLGNVINAPCYTQHQNESSSFNNTLDYLASSNGDNSFMVQSLAQTNSSLITQMPEVEKFYSDPGIMESNGDCFIEQLLDVDGLIHNSCVPWMTQ 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00196 215 FunFam Two-component response regulator 24 87 - -
Mepo1g00196 215 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 84 IPR017930 -
Mepo1g00196 215 Gene3D - 24 86 - -
Mepo1g00196 215 Pfam Myb-like DNA-binding domain 32 80 IPR001005 -
Mepo1g00196 215 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 7 138 IPR044841 GO:0003700|GO:0006355
Mepo1g00196 215 MobiDBLite consensus disorder prediction 1 25 - -
Mepo1g00196 215 SUPERFAMILY Homeodomain-like 25 84 IPR009057 -
Mepo1g00196 215 NCBIfam myb-like DNA-binding domain, SHAQKYF class 28 81 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00196 Mepo-Chr1 1747777 1749308 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00196 4 86 Response Regulator Gene Family AT3G16857 62.651 1.21e-27 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo1g00196 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00196 - K14491 mtr:11440093 196.438