Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00195 ATGATGGTTGTGGAGGATAGTTTCGTTGTTGACGATGTTTTCGGCGAAGGTTTTCCAGCGGGTATGTGTGTTCTGGCAGTTGACGACGATCCAACTTATCTCAAAGTGCTGGAGAAGCAACTTCTCACATGCAACTATAATGTTACTACAACTACAAACTCAGTGGAAGCGCTTGAATTGTTGAGGGAAAAGAGAGATATGTTTGACCTTGTAATTAGTGATGTTAGCATGCCAGAAATGGATGGCTTCAAGCTCCTTGAGCAAGTCGGACTTGAAATGGACCTACCATTCATCATGTTGTCTGTAAATAATGATAAAGAGAGTGTGATAAAGAGTGTGATACATGGCGCTTGCAACTATCTAGTGAAACCGATCCGAATGGAAGAGCTTAAGAGCATATGGCAACATGTAGTTTGA 417 0.4173 MMVVEDSFVVDDVFGEGFPAGMCVLAVDDDPTYLKVLEKQLLTCNYNVTTTTNSVEALELLREKRDMFDLVISDVSMPEMDGFKLLEQVGLEMDLPFIMLSVNNDKESVIKSVIHGACNYLVKPIRMEELKSIWQHVV 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00195 138 SMART REC_2 22 134 IPR001789 GO:0000160
Mepo1g00195 138 CDD REC_typeB_ARR-like 24 138 - -
Mepo1g00195 138 Pfam Response regulator receiver domain 24 132 IPR001789 GO:0000160
Mepo1g00195 138 Gene3D - 24 138 - -
Mepo1g00195 138 PANTHER TWO-COMPONENT RESPONSE REGULATOR 23 137 IPR045279 GO:0009736
Mepo1g00195 138 SUPERFAMILY CheY-like 21 137 IPR011006 -
Mepo1g00195 138 ProSiteProfiles Response regulatory domain profile. 23 138 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00195 Mepo-Chr1 1746228 1747680 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00195 18 138 Response Regulator Gene Family AT2G25180 68.595 2.78e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo1g00195 Response_reg 1e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00195 - K14491 mtr:11440093 240.736