Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00187 ATGCAAGTTGCCAAGGTTGCTAGGATACTGGCAGCAAAGCCAACAGGAGTTGAAGGGGAGCAGAGATCATGTACCATCATGGCTCTATTAGATGGAGGAACATTGAGAAGGCACAAGAGTTGGTTTAAGGCTGAGCCTCCAGCAATAGTAGTTGCAACAGTTGAGAGTTTGTGCCAAATGCTTGAAAGACAACTTTTTTCGCTTGGAACCTTGCGGGTGTTGGTTGTTGATGAGGTTGACTTCATTTTCAATTCTTCAAAGCAAGTGAGTTCTCTCCGGAAGATTTTGACCTCATATTCGTCTTGTAATAACCGTCAGACAGTTTTTGCCAGTGCATCTATACCACAGCACAATCGATTTCTTAACGAAGCTATGCAGCAGAAATGGACTAAGAGGGATGTGATCCATATTCACGTTAGTCCAGTGGAGCCCATGCCGTCTCGTCTATCTCATAGATTTATAGTATGTGATATAAAAAGAAAACTACAAACCCTGTTATCCTTGATTCAATCTGATGCTCCCAAGTCTGGCATTATATTTGTTAGTGAGCAGTCTGAGAAGTCGAAAAAGGCTGGAAATTCTCCATCCACGTCCCTTGTGATTGACTTTCTAAAAACATCATATCATGGTTCTTTAGATATCCTCCTCCTCGAAGATGACATGAATTTCAATTCACGAGCAGCTTCTCTGTTGGAGGTTAGGAAAGGTGGCGGCTATCTTCTAGTAGCAACAGATGTAGCAGCTAGAGGAGTTGACTTTCCAGAAATGACTCACATATACAACTTTGATCTGCCAAAAACTGCTGTAGATTATCTTCATCGAGCAGGGAGGACCTGTAGAAAACCCTTTTCTGATGTGAATTGTACTGTCACCAGCATTATAGTCTCGCAGGAGCGGTTTGTTCTGCAGAGATATGAAAATGAGTTGAGGTTTGTCTGTACAGAGCTTATTCCATAA 957 0.4211 MQVAKVARILAAKPTGVEGEQRSCTIMALLDGGTLRRHKSWFKAEPPAIVVATVESLCQMLERQLFSLGTLRVLVVDEVDFIFNSSKQVSSLRKILTSYSSCNNRQTVFASASIPQHNRFLNEAMQQKWTKRDVIHIHVSPVEPMPSRLSHRFIVCDIKRKLQTLLSLIQSDAPKSGIIFVSEQSEKSKKAGNSPSTSLVIDFLKTSYHGSLDILLLEDDMNFNSRAASLLEVRKGGGYLLVATDVAARGVDFPEMTHIYNFDLPKTAVDYLHRAGRTCRKPFSDVNCTVTSIIVSQERFVLQRYENELRFVCTELIP 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00187 318 CDD SF2_C_DEAD 149 280 - -
Mepo1g00187 318 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 304 IPR027417 -
Mepo1g00187 318 Gene3D - 1 134 IPR027417 -
Mepo1g00187 318 SMART helicmild6 198 282 IPR001650 -
Mepo1g00187 318 Pfam DEAD/DEAH box helicase 26 116 IPR011545 GO:0003676|GO:0005524
Mepo1g00187 318 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL 15 311 - -
Mepo1g00187 318 Pfam Helicase conserved C-terminal domain 161 280 IPR001650 -
Mepo1g00187 318 Gene3D - 145 315 IPR027417 -
Mepo1g00187 318 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 132 IPR014001 -
Mepo1g00187 318 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 161 318 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00187 Mepo-Chr1 1682805 1688193 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00187 2 318 Eukaryotic Initiation Factors Gene Family AT1G72730 25.153 7.49e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00187 - - mtr:120575731 614.379