Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00173 ATGGCATTGTCTGCAGATAATGAAAGTGAAGATGATTCTAAACATGATCAACTTTTCCTGGGCGTGAAGACTGAAATCGAGGATTCTGGCCATAGAGAGAAGCATGATGATTCTAAACACCATCAACATTCCTTAGGCATGAAGAATTTGAATTTAAAAGATGGGGTTTCTACAGATGGAAAAGTTGCAAAAACATTTACTTTAGATGAGCTTGCAGCCGCAACAGGGAATTTTAGGGCAGATTGCTTTGTTGGTGAAGGAGGGTTTGGCAAGGTTTATAAGGGTTACATCGAGAAAATTAATCAGGTTGTTGCAATAAAGCAACTTGACCCTGATGGACTTCAAGGAACCAGAGAATTTGTTGTTGAAGTGTTAACACTTGGTTTGGCAGAACACCCAAATCTTGTCAAGTTATTAGGATTTTGTGCTGAGGGAGAGCAGAGGCTTTTGGTTTATGAGTACATGCCTTTGGGATCTTTGGAGAATCATTTGCATGGTCAATATCCAGAAAGGGGTTTGTACCAAGCTTTTGAAATTGCCGCTAGGTGTGTTCAAGAGCAGCCTAATATGCGGCCGGTTATAGCAGATGTGGTCACAGCTCTAGATTACATTGTTTCACAAAAATATGATCCACAAGTTCATCGCTCGAGATAA 654 0.4037 MALSADNESEDDSKHDQLFLGVKTEIEDSGHREKHDDSKHHQHSLGMKNLNLKDGVSTDGKVAKTFTLDELAAATGNFRADCFVGEGGFGKVYKGYIEKINQVVAIKQLDPDGLQGTREFVVEVLTLGLAEHPNLVKLLGFCAEGEQRLLVYEYMPLGSLENHLHGQYPERGLYQAFEIAARCVQEQPNMRPVIADVVTALDYIVSQKYDPQVHRSR 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00173 217 MobiDBLite consensus disorder prediction 7 44 - -
Mepo1g00173 217 PANTHER OS07G0668900 PROTEIN 164 211 - -
Mepo1g00173 217 Gene3D Phosphorylase Kinase; domain 1 38 154 - -
Mepo1g00173 217 Pfam Protein tyrosine and serine/threonine kinase 84 209 IPR001245 GO:0004672|GO:0006468
Mepo1g00173 217 ProSiteProfiles Protein kinase domain profile. 78 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00173 217 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Mepo1g00173 217 SUPERFAMILY Protein kinase-like (PK-like) 68 215 IPR011009 -
Mepo1g00173 217 MobiDBLite consensus disorder prediction 1 50 - -
Mepo1g00173 217 FunFam probable serine/threonine-protein kinase RLCKVII 50 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00173 Mepo-Chr1 1563206 1566335 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00173 164 204 Glycoside Hydrolase AT3G07070 48.780 1.03e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mepo1g00173 PK_Tyr_Ser-Thr 1.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00173 - - mtr:11419113 236.113