Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00160 ATGCATGTAGGTCTATATATATTAAAGAGGAAGCTTGTGTCGAAAGCCGATAAAGAAGATATTAAAAGAGAGATTCAGATTCTGCAGCATTTGTCTGGTCAACCAAATATTGTGGAATTCAAAGGTGCTTATGAGGATAGCTTATCTATTCACCTTGTGCTAGAACATCGTGCTTTCGGGGAACTATTTGATAGAATCATTGCTCAGCCTAAAGGTTATTCAGAGAGAGCTGTTGCATCCTTATGCAGATGTATTGTTAATGTTGTGCACACTTGTCATTGCATGGGTATTATGCACGGTGACTTAAATCCGGAGAATTTCTTGTTCTCTACCAAGGCTAAAGCTGTAACACTCAAGGCTGTTGATTTTAGATTCTCTGTCTTCATTGAAGAAGGAAAGATTTATAATGATATGGTAGGCAGTGGTTGCTTTGTTGCTCCTGAGGTACTGCTTCGTAGTTATGGAAAAGAAATAGACATTTGGAGTGCAGGCATCATATTGTATATTCTACTTAGTGGTGGACCACCTTTTTCACCTGAAACTGACAAGGGACTATTGAATGCCGTATTGGAAGGTGAACTTGAATTAGTGAGTGAGCCATGGCCATCAATATCAGACAGTGCTAAAGATCTAGTCAAGAAGATGCTAACACCAGATCCAAAGAAGAGAATTACTTCTAAACAAGTCCTTGAACACACGTGGATGAGAGACGGTGGAGATGCCCCTGATGAACCGATTGATATTGCAGTTCTATCTAGAATGAAACAATTCAGGGCAATAAATACGTTCACGAAACTTGGGTTGAAGGTTATGGCTGAAAATATAGCGGAAGAGGTTAAAGATCTCAAGGAAACGTTTGAAAATATGGACACTGATCATAGTGGCACCATCACCTATGAAGAATTGAAGACAAGCTTGGCTCGAGTTGGATCAAAATTGTCCGAGACTGAAGTGAAGCAACTTGTGGAAACCGCTGACGTTGATAGAAAAGGGTCGATTGACTATCTTGAATTCATATCGGCTACAATGCATAGGTACAGGTTTGAGCGAGATGAACATATTCACAAGGCATTTCAGTATTTTGATAAAGACAATAGTGGATTTCAGAGCAAAGGTGGAGGAGAAACGGTGGTGTTCAAAGAGTCCGAGGGAAAAGATTGTGATTTTCGTTTATGGAAGTTTTGTTTCTCTTTCTGA 1197 0.3968 MHVGLYILKRKLVSKADKEDIKREIQILQHLSGQPNIVEFKGAYEDSLSIHLVLEHRAFGELFDRIIAQPKGYSERAVASLCRCIVNVVHTCHCMGIMHGDLNPENFLFSTKAKAVTLKAVDFRFSVFIEEGKIYNDMVGSGCFVAPEVLLRSYGKEIDIWSAGIILYILLSGGPPFSPETDKGLLNAVLEGELELVSEPWPSISDSAKDLVKKMLTPDPKKRITSKQVLEHTWMRDGGDAPDEPIDIAVLSRMKQFRAINTFTKLGLKVMAENIAEEVKDLKETFENMDTDHSGTITYEELKTSLARVGSKLSETEVKQLVETADVDRKGSIDYLEFISATMHRYRFERDEHIHKAFQYFDKDNSGFQSKGGGETVVFKESEGKDCDFRLWKFCFSF 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00160 398 SMART efh_1 281 309 IPR002048 GO:0005509
Mepo1g00160 398 SMART efh_1 317 345 IPR002048 GO:0005509
Mepo1g00160 398 Gene3D Transferase(Phosphotransferase) domain 1 63 243 - -
Mepo1g00160 398 Coils Coil 272 292 - -
Mepo1g00160 398 SUPERFAMILY EF-hand 277 369 IPR011992 -
Mepo1g00160 398 CDD EFh 281 341 IPR002048 GO:0005509
Mepo1g00160 398 Gene3D Phosphorylase Kinase; domain 1 3 62 - -
Mepo1g00160 398 Gene3D - 276 343 - -
Mepo1g00160 398 FunFam Maternal embryonic leucine zipper kinase 1 309 - -
Mepo1g00160 398 ProSiteProfiles EF-hand calcium-binding domain profile. 277 312 IPR002048 GO:0005509
Mepo1g00160 398 ProSitePatterns EF-hand calcium-binding domain. 290 302 IPR018247 -
Mepo1g00160 398 FunFam Calmodulin 1 269 378 - -
Mepo1g00160 398 Pfam EF-hand domain pair 281 342 IPR002048 GO:0005509
Mepo1g00160 398 Gene3D - 253 382 - -
Mepo1g00160 398 ProSiteProfiles EF-hand calcium-binding domain profile. 313 348 IPR002048 GO:0005509
Mepo1g00160 398 SUPERFAMILY Protein kinase-like (PK-like) 11 262 IPR011009 -
Mepo1g00160 398 PANTHER SERINE/THREONINE-PROTEIN KINASE 9 370 - -
Mepo1g00160 398 ProSiteProfiles Protein kinase domain profile. 1 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g00160 398 Pfam Protein kinase domain 9 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00160 Mepo-Chr1 1406129 1410113 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00160 7 367 EF-hand Containing Proteins AT4G04720 70.994 0.0 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mepo1g00160 Pkinase 3.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00160 K13412 - gmx:100816859 556.214