LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo1g00157	ATGTCTACAAACAAAGCTTTCCTCTTTTTAGCTCTTTTGTCCTTTTCTCCACAACTCTTCTTGATTGTTTCTTCTGCAGAAGATAATGATAATGGCCTTGTTATGAATTACTACAAAGAAGCATGTCCCCAAGCTGAAGAAATCATCAAAGAACAAGTCAAACTTCTCTACAAACGCCATAAGAACACTGCTTTCTCTTGGCTCAGAAACATTTTCCATGACTGTGCTGTTCAGAGTTGTGATGCTTCTTTGTTGCTGACATCCACAAGAAGAAGCTTGTCTGAGCAAGAACACGACAGAAGCTTTGGTTTGAGGAATTTTAGGTACATTGATACCATCAAAGAAGCTGTTGAAAGAGAGTGTCCTGGTGTTGTTTCCTGTTCTGATATTCTTGTTCTTTCTGCTAGAGAAGGCATTGTTTCGCTAGGAGGTCCTTATATTCCTCTGAAAACAGGAAGAAGGGATGGTAGAAAGAGTAGAGTGGATCTGTTGGAGGCATACCTTCCTGACCACAATGAGTCCATTTCTGCTGTTCTTGACAAATTTGGTGCCATGGGAATCGACACTCCCGGAGTTGTTGCTTTGCTTGGAGCACACAGTGTTGGTAGAACCCATTGTACAAAGTTGGTGCATCGTTTGTACCCCGAAGTTGATCCAGCTTTGAACCCAGAACACATTCCGCACATGCTTAAGAAGTGCCCTGATTCAATCCCTGACCCTAAGGCCGTGCAGTACGTGAGAAACGACCGTGGCACGCCGATGATTCTAGATAACAACTACTACAGAAATATCTTGGACAACAAGGGTCTTTTGATTGTGGATCATCAATTAGCACATGACAAGAGGACTAAGCCTTATGTGAAGAAAATGGCCAAGAGCCAAGAGTATTTCTTCAAGGAGTTTTCTAGAGCTATTACATTGCTTTCAGAAAACAATCCTCTTACTGGCACAAAGGGTGAGATCAGAAAGGAATGCAGTGTTGCCAACAAGCAGCACCATGAAGAGCCTTGA	1011	0.4253	MSTNKAFLFLALLSFSPQLFLIVSSAEDNDNGLVMNYYKEACPQAEEIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLTSTRRSLSEQEHDRSFGLRNFRYIDTIKEAVERECPGVVSCSDILVLSAREGIVSLGGPYIPLKTGRRDGRKSRVDLLEAYLPDHNESISAVLDKFGAMGIDTPGVVALLGAHSVGRTHCTKLVHRLYPEVDPALNPEHIPHMLKKCPDSIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLAHDKRTKPYVKKMAKSQEYFFKEFSRAITLLSENNPLTGTKGEIRKECSVANKQHHEEP	336

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo1g00157	336	FunFam	Peroxidase	169	308	-	-
	Mepo1g00157	336	SUPERFAMILY	Heme-dependent peroxidases	33	329	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Mepo1g00157	336	PRINTS	Haem peroxidase superfamily signature	191	206	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Mepo1g00157	336	PRINTS	Haem peroxidase superfamily signature	249	264	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Mepo1g00157	336	PRINTS	Haem peroxidase superfamily signature	143	155	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Mepo1g00157	336	PRINTS	Haem peroxidase superfamily signature	64	78	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Mepo1g00157	336	PRINTS	Haem peroxidase superfamily signature	125	142	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Mepo1g00157	336	PANTHER	-	21	329	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Mepo1g00157	336	CDD	secretory_peroxidase	32	327	IPR033905	GO:0004601\|GO:0042744
	Mepo1g00157	336	Pfam	Peroxidase	50	293	IPR002016	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo1g00157	Mepo-Chr1	1373012	1375553	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo1g00157	5	332	Peroxidase	AT4G21960	77.946	0.0	556

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo1g00157	K00430		-	gmx:547513	580.096

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