Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00138 ATGTTAACATTTCCGACGATGAATCTAATAAGCAAAAACGGAGCAACATGGTGTGATGAGAATAATGAAAATGATCATCAAGGACGTACGAATCGTGTAACTATGGATGAAGTTGATTTCTTCTCAAATGATAAATCATCATCGTCAGAACAACTTCATGATGATGATGATGATGTTTCAACGATGATCAAGAAGAATAATCAGATTTACGATCCTCATTGCGCTGACCATGTCAACACTGGCTTGCAACTCCTTATTACTAACACTGGAAGTGATCAATCAATGGTGGATGATGGAACTTCAATAAATGCTCAAGATAAGCGTACCAAGACTCAACAGACGGAGCAATTGCAAGAGGAGCTTGGACGTGTGAATGCAGAGAACCAAAAGCTGAAGGAAATGCTGAGTGACATGAGCAGTAGCTACACAAACTTGCATAAGCGTTTTATGTCCTTAATGCAACAGCAACAGAACCAAACCACAGAACATGATCAGATTGTCAAAGGAAAGTTCATGAATGCTCCAGCAGCAGAAGTAGATGATCAGCAAGAGCCTGAACCATGCACACCTCAGAACAATCAGAAAGATCCTGATCCAGACGCTTCAGAACTAGTACAACTTTTGGACCGAAGTCAGCTTCCCAGATTAAACCCCTCCAACGCCGCTGATCAAGCCAATGCTGAAGCCACTATGAGAAAAGCACGTGTCTCAGTCCGTGCTCGATCAGAAGCCCACATGATCAATGATGGATGCCAATGGCGAAAATATGGACAAAAGATGGCTAAAGGAAACCCCTGTCCTCGCGCGTATTACAGATGCACAATGGCTCTTGGTTGTCCCGTTCGCAAACAAGTTCAACGTTGTGCGGAGGACAGATCAATTTTGATAACAACATATGAAGGGACACATAGCCATCCACTCCCACCTGCTGCTATGCCAATGGCCTCGACCACCGCAGCTGCTGCTACCGTGTTACTATCTGGGTCAATGTCAAGTGCTGATGGGGTGATGAACCCCAATTTACTAGCCAGAATTCTTCCTAATTGCTCTTCTAGCATGGCCACACTCTCAGCATCAGCACCATTTCCTACTGTGACACTAGACCTTACACGCGACACTACAGACAATAACGGAAATTCTCCTTCCCAATTCCAGCTTGGACAGCCTCAAAACTTCGGATCAGGACAATTACCACAAGTGATTGCACAAGCACTTTATAACCAATCCAAATTCTCCGGCCTTCAAATGTCTCAAGATGTTGGAGGGTCTTCTCAATTGCATCCAACTCAACAGGCATCATCACTCAGTGCTGCCATCACCGCGGATCCAAACTTCACGGCAGCACTCGCAGCTGCTATCTCCTCCATAATTGGTGCTGCTCCTCCCAGCAACAATAACAGTAATCCCAATATCATCAACAGTGCTACCTACAATCAGTAG 1440 0.4472 MLTFPTMNLISKNGATWCDENNENDHQGRTNRVTMDEVDFFSNDKSSSSEQLHDDDDDVSTMIKKNNQIYDPHCADHVNTGLQLLITNTGSDQSMVDDGTSINAQDKRTKTQQTEQLQEELGRVNAENQKLKEMLSDMSSSYTNLHKRFMSLMQQQQNQTTEHDQIVKGKFMNAPAAEVDDQQEPEPCTPQNNQKDPDPDASELVQLLDRSQLPRLNPSNAADQANAEATMRKARVSVRARSEAHMINDGCQWRKYGQKMAKGNPCPRAYYRCTMALGCPVRKQVQRCAEDRSILITTYEGTHSHPLPPAAMPMASTTAAAATVLLSGSMSSADGVMNPNLLARILPNCSSSMATLSASAPFPTVTLDLTRDTTDNNGNSPSQFQLGQPQNFGSGQLPQVIAQALYNQSKFSGLQMSQDVGGSSQLHPTQQASSLSAAITADPNFTAALAAAISSIIGAAPPSNNNSNPNIINSATYNQ 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00138 479 Pfam WRKY DNA -binding domain 248 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g00138 479 MobiDBLite consensus disorder prediction 210 229 - -
Mepo1g00138 479 SUPERFAMILY WRKY DNA-binding domain 240 308 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo1g00138 479 MobiDBLite consensus disorder prediction 185 199 - -
Mepo1g00138 479 Coils Coil 107 134 - -
Mepo1g00138 479 FunFam probable WRKY transcription factor 31 232 309 - -
Mepo1g00138 479 ProSiteProfiles WRKY domain profile. 242 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g00138 479 SMART WRKY_cls 247 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g00138 479 MobiDBLite consensus disorder prediction 212 226 - -
Mepo1g00138 479 MobiDBLite consensus disorder prediction 177 201 - -
Mepo1g00138 479 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 80 468 IPR044810 GO:0003700
Mepo1g00138 479 MobiDBLite consensus disorder prediction 458 479 - -
Mepo1g00138 479 Gene3D WRKY domain 232 309 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00138 Mepo-Chr1 1201076 1203275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00138 19 457 WRKY Transcription Factor Family AT1G62300 52.075 4.39e-124 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo1g00138 WRKY 3.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00138 - - mtr:11439068 788.104